Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AL138966.2-201ENST00000621997 464 ntBASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 AL023973.1-201ENST00000624619 620 ntBASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 FST-202ENST00000396947 2538 ntTSL 5 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11.33□□□□□ -0.59
MRPL55Q7Z7F7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
MRPL55Q7Z7F7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
MRPL55Q7Z7F7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
MRPL55Q7Z7F7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
MRPL55Q7Z7F7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC11.33□□□□□ -0.59
MRPL55Q7Z7F7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 COX11P1-201ENST00000489116 835 ntBASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 AL136038.4-201ENST00000603606 1261 ntBASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 AL023806.1-201ENST00000603994 1649 ntBASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL55Q7Z7F7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 KRT18P48-201ENST00000434763 852 ntBASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL55Q7Z7F7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms