Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PTCHD4Q6ZW05 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 HMGA1P5-201ENST00000412453 271 ntBASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 PCDHA14-201ENST00000506751 2298 ntBASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 PCDHB19P-201ENST00000570871 2371 ntBASIC16.18■□□□□ 0.18
PTCHD4Q6ZW05 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 AGGF1P2-201ENST00000426656 2106 ntBASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 MIR3917-201ENST00000580971 93 ntBASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 REXO1L11P-201ENST00000620964 1927 ntBASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 AC105020.1-201ENST00000435356 2205 ntBASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PTCHD4Q6ZW05 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms