Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 FAM86EP-206ENST00000510506 987 ntBASIC19.79■□□□□ 0.76
SHC4Q6S5L8 AC011840.4-201ENST00000578471 627 ntBASIC19.79■□□□□ 0.76
SHC4Q6S5L8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SHC4Q6S5L8 AP005901.3-202ENST00000581653 237 ntBASIC19.79■□□□□ 0.76
SHC4Q6S5L8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHC4Q6S5L8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHC4Q6S5L8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SHC4Q6S5L8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHC4Q6S5L8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHC4Q6S5L8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.79■□□□□ 0.76
SHC4Q6S5L8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AC092053.1-201ENST00000605787 1936 ntBASIC19.78■□□□□ 0.76
SHC4Q6S5L8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 KRT8P10-201ENST00000450021 1447 ntBASIC19.78■□□□□ 0.76
SHC4Q6S5L8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AL121956.5-201ENST00000625261 221 ntBASIC19.78■□□□□ 0.76
SHC4Q6S5L8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AC093525.9-201ENST00000624961 1746 ntBASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AC016734.2-201ENST00000624325 1377 ntBASIC19.78■□□□□ 0.76
SHC4Q6S5L8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SHC4Q6S5L8 AGGF1P2-201ENST00000426656 2106 ntBASIC19.78■□□□□ 0.76
SHC4Q6S5L8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 LINC02012-201ENST00000608206 1725 ntBASIC19.77■□□□□ 0.76
SHC4Q6S5L8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 NTF6B-201ENST00000591913 560 ntBASIC19.77■□□□□ 0.76
SHC4Q6S5L8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
SHC4Q6S5L8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHC4Q6S5L8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.77■□□□□ 0.75
SHC4Q6S5L8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHC4Q6S5L8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHC4Q6S5L8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 MYCLP1-201ENST00000372451 1075 ntBASIC19.76■□□□□ 0.75
SHC4Q6S5L8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC4Q6S5L8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms