Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC144NLQ6NUI1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCDC144NLQ6NUI1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 FOSL1P1-201ENST00000511041 816 ntBASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 AC091304.2-201ENST00000564639 760 ntBASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC144NLQ6NUI1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 AC005104.2-201ENST00000427818 678 ntBASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 CLEC4GP1-201ENST00000596555 870 ntBASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 INTS4P1-201ENST00000438455 1935 ntBASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC144NLQ6NUI1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 RCN1P2-201ENST00000398357 915 ntBASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC144NLQ6NUI1 MIR5100-201ENST00000579544 119 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms