Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CERKLQ49MI3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CERKLQ49MI3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CERKLQ49MI3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.47■□□□□ 0.87
CERKLQ49MI3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 AP002414.1-201ENST00000391405 1147 ntBASIC20.46■□□□□ 0.87
CERKLQ49MI3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 MTDHP5-201ENST00000598980 586 ntBASIC20.46■□□□□ 0.87
CERKLQ49MI3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CERKLQ49MI3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.46■□□□□ 0.87
CERKLQ49MI3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.45■□□□□ 0.86
CERKLQ49MI3 ACTG1P4-201ENST00000425123 1122 ntBASIC20.45■□□□□ 0.86
CERKLQ49MI3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CERKLQ49MI3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CERKLQ49MI3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CERKLQ49MI3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 MRPL20P1-201ENST00000400819 433 ntBASIC20.44■□□□□ 0.86
CERKLQ49MI3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 AC092183.1-201ENST00000469884 875 ntBASIC20.44■□□□□ 0.86
CERKLQ49MI3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 AC018845.2-201ENST00000568326 409 ntBASIC20.44■□□□□ 0.86
CERKLQ49MI3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.44■□□□□ 0.86
CERKLQ49MI3 GGTLC5P-201ENST00000617623 998 ntBASIC20.44■□□□□ 0.86
CERKLQ49MI3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms