Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.87□□□□□ -0.03
SSBP1Q04837 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSBP1Q04837 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.87□□□□□ -0.03
SSBP1Q04837 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.87□□□□□ -0.03
SSBP1Q04837 TSPY17P-201ENST00000450329 467 ntBASIC14.87□□□□□ -0.03
SSBP1Q04837 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.87□□□□□ -0.03
SSBP1Q04837 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSBP1Q04837 AL356309.3-201ENST00000624132 1934 ntBASIC14.87□□□□□ -0.03
SSBP1Q04837 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSBP1Q04837 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.86□□□□□ -0.03
SSBP1Q04837 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP1Q04837 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SSBP1Q04837 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP1Q04837 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SSBP1Q04837 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 SLC25A1P3-201ENST00000395415 828 ntBASIC14.86□□□□□ -0.03
SSBP1Q04837 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 AP003041.3-201ENST00000527151 707 ntBASIC14.86□□□□□ -0.03
SSBP1Q04837 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.86□□□□□ -0.03
SSBP1Q04837 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.86□□□□□ -0.03
SSBP1Q04837 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP1Q04837 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SSBP1Q04837 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP1Q04837 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP1Q04837 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SSBP1Q04837 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP1Q04837 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 SLC25A1P2-201ENST00000430693 912 ntBASIC14.85□□□□□ -0.03
SSBP1Q04837 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.85□□□□□ -0.03
SSBP1Q04837 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
SSBP1Q04837 AL023803.3-201ENST00000615559 522 ntBASIC14.85□□□□□ -0.03
SSBP1Q04837 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP1Q04837 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP1Q04837 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms