Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP1P78357 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP1P78357 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP1P78357 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP1P78357 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP1P78357 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP1P78357 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP1P78357 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 TUBB3P1-201ENST00000405796 1332 ntBASIC20.73■□□□□ 0.91
CNTNAP1P78357 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CNTNAP1P78357 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 AC002558.1-201ENST00000488906 803 ntBASIC20.72■□□□□ 0.91
CNTNAP1P78357 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 SLC25A39P2-201ENST00000537614 270 ntBASIC20.72■□□□□ 0.91
CNTNAP1P78357 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 AL512356.2-201ENST00000546955 174 ntBASIC20.72■□□□□ 0.91
CNTNAP1P78357 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.72■□□□□ 0.91
CNTNAP1P78357 SPDYE22P-201ENST00000582158 798 ntBASIC20.72■□□□□ 0.91
CNTNAP1P78357 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 AC116407.2-201ENST00000613639 860 ntBASIC20.72■□□□□ 0.91
CNTNAP1P78357 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 TIMM8BP1-201ENST00000452384 211 ntBASIC20.72■□□□□ 0.91
CNTNAP1P78357 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 IGHV3-52-201ENST00000519770 353 ntBASIC20.72■□□□□ 0.91
CNTNAP1P78357 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.72■□□□□ 0.91
CNTNAP1P78357 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP1P78357 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 AP000974.1-201ENST00000623909 2387 ntBASIC20.71■□□□□ 0.91
CNTNAP1P78357 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 AC107890.1-201ENST00000422478 521 ntBASIC20.71■□□□□ 0.91
CNTNAP1P78357 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 RN7SL692P-201ENST00000464677 288 ntBASIC20.71■□□□□ 0.91
CNTNAP1P78357 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.71■□□□□ 0.91
CNTNAP1P78357 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP1P78357 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.7■□□□□ 0.91
CNTNAP1P78357 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms