Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LMO4P61968 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.35□□□□□ -0.11
LMO4P61968 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO4P61968 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO4P61968 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LMO4P61968 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LMO4P61968 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO4P61968 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO4P61968 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.35□□□□□ -0.11
LMO4P61968 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO4P61968 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
LMO4P61968 OR7E47P-204ENST00000575924 449 ntBASIC14.35□□□□□ -0.11
LMO4P61968 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.35□□□□□ -0.11
LMO4P61968 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO4P61968 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LMO4P61968 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO4P61968 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO4P61968 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO4P61968 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.34□□□□□ -0.11
LMO4P61968 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.34□□□□□ -0.11
LMO4P61968 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
LMO4P61968 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.34□□□□□ -0.11
LMO4P61968 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.34□□□□□ -0.11
LMO4P61968 AC004967.1-201ENST00000453589 447 ntBASIC14.34□□□□□ -0.11
LMO4P61968 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO4P61968 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
LMO4P61968 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LMO4P61968 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO4P61968 AP001160.2-201ENST00000596071 487 ntBASIC14.34□□□□□ -0.11
LMO4P61968 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 AL513190.1-201ENST00000621254 727 ntBASIC14.34□□□□□ -0.11
LMO4P61968 AC134684.3-201ENST00000641758 218 ntBASIC14.34□□□□□ -0.11
LMO4P61968 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LMO4P61968 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO4P61968 PI4KAP1-204ENST00000612579 1703 ntBASIC14.34□□□□□ -0.11
LMO4P61968 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.34□□□□□ -0.11
LMO4P61968 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LMO4P61968 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO4P61968 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LMO4P61968 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO4P61968 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LMO4P61968 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LMO4P61968 AL354751.1-201ENST00000412768 1863 ntBASIC14.33□□□□□ -0.11
LMO4P61968 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
LMO4P61968 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LMO4P61968 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.33□□□□□ -0.12
LMO4P61968 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LMO4P61968 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LMO4P61968 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO4P61968 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LMO4P61968 RPS8P6-201ENST00000426177 609 ntBASIC14.33□□□□□ -0.12
LMO4P61968 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.33□□□□□ -0.12
LMO4P61968 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.33□□□□□ -0.12
LMO4P61968 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.33□□□□□ -0.12
LMO4P61968 AC096734.2-201ENST00000562054 433 ntBASIC14.33□□□□□ -0.12
LMO4P61968 AC005829.1-201ENST00000570002 483 ntBASIC14.33□□□□□ -0.12
LMO4P61968 AC079781.4-201ENST00000641908 219 ntBASIC14.33□□□□□ -0.12
LMO4P61968 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LMO4P61968 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms