Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SPCS3P61009 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPCS3P61009 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
SPCS3P61009 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPCS3P61009 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SPCS3P61009 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.33□□□□□ -0.12
SPCS3P61009 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SPCS3P61009 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.33□□□□□ -0.12
SPCS3P61009 GCSHP5-201ENST00000443090 522 ntBASIC14.33□□□□□ -0.12
SPCS3P61009 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SPCS3P61009 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.33□□□□□ -0.12
SPCS3P61009 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.33□□□□□ -0.12
SPCS3P61009 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.33□□□□□ -0.12
SPCS3P61009 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.33□□□□□ -0.12
SPCS3P61009 AC092865.7-201ENST00000641832 219 ntBASIC14.33□□□□□ -0.12
SPCS3P61009 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SPCS3P61009 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SPCS3P61009 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.33□□□□□ -0.12
SPCS3P61009 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
SPCS3P61009 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SPCS3P61009 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SPCS3P61009 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SPCS3P61009 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
SPCS3P61009 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPCS3P61009 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.32□□□□□ -0.12
SPCS3P61009 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.32□□□□□ -0.12
SPCS3P61009 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.32□□□□□ -0.12
SPCS3P61009 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SPCS3P61009 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.32□□□□□ -0.12
SPCS3P61009 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.32□□□□□ -0.12
SPCS3P61009 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.32□□□□□ -0.12
SPCS3P61009 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.32□□□□□ -0.12
SPCS3P61009 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.32□□□□□ -0.12
SPCS3P61009 DDX43P3-201ENST00000441064 443 ntBASIC14.32□□□□□ -0.12
SPCS3P61009 TSPY20P-201ENST00000450910 630 ntBASIC14.32□□□□□ -0.12
SPCS3P61009 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.32□□□□□ -0.12
SPCS3P61009 AL512604.3-201ENST00000569583 964 ntBASIC14.32□□□□□ -0.12
SPCS3P61009 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 AC024243.1-201ENST00000609234 778 ntBASIC14.32□□□□□ -0.12
SPCS3P61009 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.32□□□□□ -0.12
SPCS3P61009 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.32□□□□□ -0.12
SPCS3P61009 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPCS3P61009 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.32□□□□□ -0.12
SPCS3P61009 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.31□□□□□ -0.12
SPCS3P61009 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.31□□□□□ -0.12
SPCS3P61009 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPCS3P61009 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPCS3P61009 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.31□□□□□ -0.12
SPCS3P61009 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.31□□□□□ -0.12
SPCS3P61009 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms