Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN2P57739 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN2P57739 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN2P57739 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLDN2P57739 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 AC023274.1-201ENST00000418278 595 ntBASIC17.3■□□□□ 0.36
CLDN2P57739 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN2P57739 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN2P57739 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.3■□□□□ 0.36
CLDN2P57739 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN2P57739 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN2P57739 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN2P57739 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN2P57739 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN2P57739 AC064836.3-201ENST00000607928 673 ntBASIC17.3■□□□□ 0.36
CLDN2P57739 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN2P57739 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN2P57739 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN2P57739 AC009336.1-201ENST00000608941 1553 ntBASIC17.3■□□□□ 0.36
CLDN2P57739 BCL2-203ENST00000589955 5011 ntBASIC17.3■□□□□ 0.36
CLDN2P57739 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN2P57739 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 HTR7P1-202ENST00000624664 4411 ntBASIC17.3■□□□□ 0.36
CLDN2P57739 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLDN2P57739 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN2P57739 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN2P57739 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLDN2P57739 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN2P57739 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN2P57739 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN2P57739 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN2P57739 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN2P57739 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN2P57739 AC010327.4-202ENST00000591484 748 ntBASIC17.29■□□□□ 0.36
CLDN2P57739 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN2P57739 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN2P57739 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN2P57739 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN2P57739 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 ABALON-201ENST00000629058 1903 ntBASIC17.29■□□□□ 0.36
CLDN2P57739 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN2P57739 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN2P57739 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN2P57739 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN2P57739 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN2P57739 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN2P57739 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLDN2P57739 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN2P57739 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLDN2P57739 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLDN2P57739 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN2P57739 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN2P57739 KRT18P2-201ENST00000447938 1258 ntBASIC17.28■□□□□ 0.36
CLDN2P57739 AC002558.1-201ENST00000488906 803 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms