Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.36■□□□□ 0.53
HADHBP55084 AL353593.2-201ENST00000602529 1483 ntBASIC18.36■□□□□ 0.53
HADHBP55084 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.36■□□□□ 0.53
HADHBP55084 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HADHBP55084 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HADHBP55084 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.35■□□□□ 0.53
HADHBP55084 AC005915.1-201ENST00000624912 2018 ntBASIC18.35■□□□□ 0.53
HADHBP55084 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.35■□□□□ 0.53
HADHBP55084 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
HADHBP55084 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HADHBP55084 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HADHBP55084 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.35■□□□□ 0.53
HADHBP55084 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 FAM220CP-201ENST00000395253 831 ntBASIC18.35■□□□□ 0.53
HADHBP55084 TSPY22P-201ENST00000427496 604 ntBASIC18.35■□□□□ 0.53
HADHBP55084 AL671277.2-201ENST00000458060 996 ntBASIC18.35■□□□□ 0.53
HADHBP55084 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 AC022616.7-201ENST00000525383 220 ntBASIC18.35■□□□□ 0.53
HADHBP55084 AC090616.6-201ENST00000582640 721 ntBASIC18.35■□□□□ 0.53
HADHBP55084 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.35■□□□□ 0.53
HADHBP55084 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.35■□□□□ 0.53
HADHBP55084 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.35■□□□□ 0.53
HADHBP55084 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.35■□□□□ 0.53
HADHBP55084 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.35■□□□□ 0.53
HADHBP55084 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HADHBP55084 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
HADHBP55084 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
HADHBP55084 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HADHBP55084 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.34■□□□□ 0.53
HADHBP55084 AC211429.1-201ENST00000415277 523 ntBASIC18.34■□□□□ 0.53
HADHBP55084 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.34■□□□□ 0.53
HADHBP55084 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.34■□□□□ 0.53
HADHBP55084 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.34■□□□□ 0.53
HADHBP55084 AC111152.3-201ENST00000569699 673 ntBASIC18.34■□□□□ 0.53
HADHBP55084 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.34■□□□□ 0.53
HADHBP55084 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HADHBP55084 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.34■□□□□ 0.53
HADHBP55084 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.34■□□□□ 0.53
HADHBP55084 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
HADHBP55084 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 EGFEM1P-202ENST00000431685 1563 ntBASIC18.34■□□□□ 0.53
HADHBP55084 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HADHBP55084 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
HADHBP55084 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.33■□□□□ 0.53
HADHBP55084 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
HADHBP55084 KRT8P10-201ENST00000450021 1447 ntBASIC18.33■□□□□ 0.53
HADHBP55084 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HADHBP55084 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HADHBP55084 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.33■□□□□ 0.53
HADHBP55084 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HADHBP55084 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHBP55084 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HADHBP55084 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HADHBP55084 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HADHBP55084 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.33■□□□□ 0.52
HADHBP55084 AC246785.2-201ENST00000432512 513 ntBASIC18.33■□□□□ 0.52
HADHBP55084 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.33■□□□□ 0.52
HADHBP55084 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.33■□□□□ 0.52
HADHBP55084 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HADHBP55084 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.33■□□□□ 0.52
HADHBP55084 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.33■□□□□ 0.52
HADHBP55084 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.33■□□□□ 0.52
HADHBP55084 LINC01023-201ENST00000606054 436 ntBASIC18.33■□□□□ 0.52
HADHBP55084 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.33■□□□□ 0.52
HADHBP55084 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HADHBP55084 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.33■□□□□ 0.52
HADHBP55084 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HADHBP55084 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHBP55084 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHBP55084 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HADHBP55084 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HADHBP55084 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HADHBP55084 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms