Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 ANO7L1-203ENST00000602586 1720 ntBASIC19.45■□□□□ 0.7
BRCA2P51587 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 AL592309.1-201ENST00000443127 649 ntBASIC19.45■□□□□ 0.7
BRCA2P51587 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 IGHV3-71-201ENST00000523324 359 ntBASIC19.45■□□□□ 0.7
BRCA2P51587 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BRCA2P51587 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.45■□□□□ 0.7
BRCA2P51587 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.44■□□□□ 0.7
BRCA2P51587 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.44■□□□□ 0.7
BRCA2P51587 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.44■□□□□ 0.7
BRCA2P51587 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.44■□□□□ 0.7
BRCA2P51587 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BRCA2P51587 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
BRCA2P51587 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 GPR53P-205ENST00000457298 1084 ntBASIC19.44■□□□□ 0.7
BRCA2P51587 AC084346.2-201ENST00000607097 949 ntBASIC19.44■□□□□ 0.7
BRCA2P51587 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.44■□□□□ 0.7
BRCA2P51587 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.44■□□□□ 0.7
BRCA2P51587 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCA2P51587 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.44■□□□□ 0.7
BRCA2P51587 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.43■□□□□ 0.7
BRCA2P51587 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.43■□□□□ 0.7
BRCA2P51587 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRCA2P51587 CXCL1P1-201ENST00000502804 216 ntBASIC19.43■□□□□ 0.7
BRCA2P51587 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.43■□□□□ 0.7
BRCA2P51587 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.43■□□□□ 0.7
BRCA2P51587 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
BRCA2P51587 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRCA2P51587 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.43■□□□□ 0.7
BRCA2P51587 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRCA2P51587 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRCA2P51587 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.43■□□□□ 0.7
BRCA2P51587 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.43■□□□□ 0.7
BRCA2P51587 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.43■□□□□ 0.7
BRCA2P51587 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.43■□□□□ 0.7
BRCA2P51587 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BRCA2P51587 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRCA2P51587 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.43■□□□□ 0.7
BRCA2P51587 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRCA2P51587 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.43■□□□□ 0.7
BRCA2P51587 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BRCA2P51587 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRCA2P51587 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.42■□□□□ 0.7
BRCA2P51587 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.42■□□□□ 0.7
BRCA2P51587 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.42■□□□□ 0.7
BRCA2P51587 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.42■□□□□ 0.7
BRCA2P51587 AC112191.1-201ENST00000523689 701 ntBASIC19.42■□□□□ 0.7
BRCA2P51587 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.42■□□□□ 0.7
BRCA2P51587 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
BRCA2P51587 GMCL1P1-201ENST00000463439 1581 ntBASIC19.42■□□□□ 0.7
BRCA2P51587 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BRCA2P51587 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 ACA64.2-201ENST00000459014 129 ntBASIC19.42■□□□□ 0.7
BRCA2P51587 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 AC079140.1-201ENST00000508039 487 ntBASIC19.42■□□□□ 0.7
BRCA2P51587 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.42■□□□□ 0.7
BRCA2P51587 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.42■□□□□ 0.7
BRCA2P51587 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BRCA2P51587 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
BRCA2P51587 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRCA2P51587 AP000997.3-201ENST00000623333 2250 ntBASIC19.42■□□□□ 0.7
BRCA2P51587 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 MIR4525-201ENST00000580000 75 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.41■□□□□ 0.7
BRCA2P51587 AC007064.4-201ENST00000637740 555 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 AC084121.4-201ENST00000641598 221 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 AF228730.8-201ENST00000642140 221 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.41■□□□□ 0.7
BRCA2P51587 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms