Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PDE6CP51160 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PDE6CP51160 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.99■□□□□ 0.63
PDE6CP51160 LINC01451-201ENST00000623792 534 ntBASIC18.99■□□□□ 0.63
PDE6CP51160 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 REXO1L11P-201ENST00000620964 1927 ntBASIC18.99■□□□□ 0.63
PDE6CP51160 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PDE6CP51160 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE6CP51160 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE6CP51160 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PDE6CP51160 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PDE6CP51160 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDE6CP51160 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDE6CP51160 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE6CP51160 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE6CP51160 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE6CP51160 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE6CP51160 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.98■□□□□ 0.63
PDE6CP51160 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
PDE6CP51160 BX276092.7-203ENST00000637198 1536 ntBASIC18.98■□□□□ 0.63
PDE6CP51160 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE6CP51160 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE6CP51160 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE6CP51160 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDE6CP51160 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6CP51160 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.97■□□□□ 0.63
PDE6CP51160 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.97■□□□□ 0.63
PDE6CP51160 PP12613-201ENST00000424958 2230 ntBASIC18.97■□□□□ 0.63
PDE6CP51160 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PDE6CP51160 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.97■□□□□ 0.63
PDE6CP51160 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDE6CP51160 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PDE6CP51160 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PDE6CP51160 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.97■□□□□ 0.63
PDE6CP51160 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.97■□□□□ 0.63
PDE6CP51160 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.97■□□□□ 0.63
PDE6CP51160 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PDE6CP51160 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.97■□□□□ 0.63
PDE6CP51160 FOSL1P1-201ENST00000511041 816 ntBASIC18.97■□□□□ 0.63
PDE6CP51160 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.97■□□□□ 0.63
PDE6CP51160 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.97■□□□□ 0.63
PDE6CP51160 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PDE6CP51160 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.97■□□□□ 0.63
PDE6CP51160 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDE6CP51160 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PDE6CP51160 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PDE6CP51160 AL138688.1-201ENST00000624851 1594 ntBASIC18.97■□□□□ 0.63
PDE6CP51160 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6CP51160 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE6CP51160 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDE6CP51160 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE6CP51160 SIRPAP1-201ENST00000448467 1770 ntBASIC18.96■□□□□ 0.63
PDE6CP51160 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PDE6CP51160 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PDE6CP51160 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PDE6CP51160 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6CP51160 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6CP51160 KRT18P31-201ENST00000506277 1292 ntBASIC18.96■□□□□ 0.63
PDE6CP51160 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.96■□□□□ 0.63
PDE6CP51160 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE6CP51160 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 IFNL4P1-201ENST00000607083 540 ntBASIC18.96■□□□□ 0.63
PDE6CP51160 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms