Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBP50607 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBP50607 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBP50607 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.5■□□□□ 0.55
TUBP50607 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.5■□□□□ 0.55
TUBP50607 AC103564.2-201ENST00000432853 1299 ntBASIC18.5■□□□□ 0.55
TUBP50607 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.5■□□□□ 0.55
TUBP50607 AC018712.1-201ENST00000455767 687 ntBASIC18.5■□□□□ 0.55
TUBP50607 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TUBP50607 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TUBP50607 AL139288.1-201ENST00000623748 933 ntBASIC18.5■□□□□ 0.55
TUBP50607 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TUBP50607 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TUBP50607 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TUBP50607 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBP50607 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TUBP50607 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.5■□□□□ 0.55
TUBP50607 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBP50607 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBP50607 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBP50607 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBP50607 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBP50607 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBP50607 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBP50607 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBP50607 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBP50607 HLA-A-201ENST00000376802 1334 ntBASIC18.49■□□□□ 0.55
TUBP50607 AC008894.3-201ENST00000624324 3103 ntBASIC18.49■□□□□ 0.55
TUBP50607 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBP50607 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.49■□□□□ 0.55
TUBP50607 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBP50607 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.49■□□□□ 0.55
TUBP50607 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
TUBP50607 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TUBP50607 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TUBP50607 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBP50607 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TUBP50607 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TUBP50607 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBP50607 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBP50607 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBP50607 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.49■□□□□ 0.55
TUBP50607 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TUBP50607 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBP50607 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TUBP50607 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBP50607 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.48■□□□□ 0.55
TUBP50607 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.48■□□□□ 0.55
TUBP50607 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.48■□□□□ 0.55
TUBP50607 DDX43P3-201ENST00000441064 443 ntBASIC18.48■□□□□ 0.55
TUBP50607 AC073648.2-201ENST00000510116 352 ntBASIC18.48■□□□□ 0.55
TUBP50607 RNA5SP419-201ENST00000515908 135 ntBASIC18.48■□□□□ 0.55
TUBP50607 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.48■□□□□ 0.55
TUBP50607 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBP50607 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBP50607 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.48■□□□□ 0.55
TUBP50607 AD001527.2-201ENST00000622994 785 ntBASIC18.48■□□□□ 0.55
TUBP50607 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TUBP50607 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.48■□□□□ 0.55
TUBP50607 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TUBP50607 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBP50607 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBP50607 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms