Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CENPAP49450 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CENPAP49450 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.96■□□□□ 0.15
CENPAP49450 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.96■□□□□ 0.15
CENPAP49450 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CENPAP49450 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CENPAP49450 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CENPAP49450 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CENPAP49450 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.96■□□□□ 0.14
CENPAP49450 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CENPAP49450 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CENPAP49450 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CENPAP49450 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CENPAP49450 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.95■□□□□ 0.14
CENPAP49450 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.95■□□□□ 0.14
CENPAP49450 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.95■□□□□ 0.14
CENPAP49450 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.95■□□□□ 0.14
CENPAP49450 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CENPAP49450 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.95■□□□□ 0.14
CENPAP49450 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.95■□□□□ 0.14
CENPAP49450 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.95■□□□□ 0.14
CENPAP49450 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.95■□□□□ 0.14
CENPAP49450 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 RASA4DP-201ENST00000460726 1199 ntBASIC15.95■□□□□ 0.14
CENPAP49450 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CENPAP49450 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CENPAP49450 AC010203.1-204ENST00000548782 407 ntBASIC15.95■□□□□ 0.14
CENPAP49450 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.95■□□□□ 0.14
CENPAP49450 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.95■□□□□ 0.14
CENPAP49450 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.95■□□□□ 0.14
CENPAP49450 AC005363.2-201ENST00000618631 242 ntBASIC15.95■□□□□ 0.14
CENPAP49450 AL138966.2-201ENST00000621997 464 ntBASIC15.95■□□□□ 0.14
CENPAP49450 LINC01451-201ENST00000623792 534 ntBASIC15.95■□□□□ 0.14
CENPAP49450 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.95■□□□□ 0.14
CENPAP49450 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.95■□□□□ 0.14
CENPAP49450 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CENPAP49450 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.95■□□□□ 0.14
CENPAP49450 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.95■□□□□ 0.14
CENPAP49450 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.95■□□□□ 0.14
CENPAP49450 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CENPAP49450 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CENPAP49450 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CENPAP49450 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 LINC00167-201ENST00000530583 1419 ntBASIC15.94■□□□□ 0.14
CENPAP49450 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
CENPAP49450 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CENPAP49450 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CENPAP49450 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
CENPAP49450 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CENPAP49450 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CENPAP49450 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.94■□□□□ 0.14
CENPAP49450 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CENPAP49450 DDX43P3-201ENST00000441064 443 ntBASIC15.94■□□□□ 0.14
CENPAP49450 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.94■□□□□ 0.14
CENPAP49450 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.94■□□□□ 0.14
CENPAP49450 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.94■□□□□ 0.14
CENPAP49450 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.94■□□□□ 0.14
CENPAP49450 AL031432.5-201ENST00000641059 760 ntBASIC15.94■□□□□ 0.14
CENPAP49450 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
CENPAP49450 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.94■□□□□ 0.14
CENPAP49450 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.94■□□□□ 0.14
CENPAP49450 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.94■□□□□ 0.14
CENPAP49450 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CENPAP49450 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CENPAP49450 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.94■□□□□ 0.14
CENPAP49450 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.94■□□□□ 0.14
CENPAP49450 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CENPAP49450 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
CENPAP49450 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms