Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TNFSF9P41273 AC012640.2-201ENST00000561606 901 ntBASIC18.97■□□□□ 0.63
TNFSF9P41273 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.97■□□□□ 0.63
TNFSF9P41273 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.97■□□□□ 0.63
TNFSF9P41273 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.97■□□□□ 0.63
TNFSF9P41273 FAM215A-202ENST00000632077 792 ntBASIC18.97■□□□□ 0.63
TNFSF9P41273 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF9P41273 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF9P41273 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF9P41273 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
TNFSF9P41273 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TNFSF9P41273 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TNFSF9P41273 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF9P41273 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFSF9P41273 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFSF9P41273 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFSF9P41273 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF9P41273 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF9P41273 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF9P41273 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.96■□□□□ 0.63
TNFSF9P41273 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF9P41273 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF9P41273 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 PRYP5-201ENST00000451909 266 ntBASIC18.96■□□□□ 0.63
TNFSF9P41273 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 OR7E14P-202ENST00000530490 1290 ntBASIC18.96■□□□□ 0.63
TNFSF9P41273 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNFSF9P41273 AP001005.1-201ENST00000571755 1248 ntBASIC18.96■□□□□ 0.63
TNFSF9P41273 AC064862.7-201ENST00000604520 867 ntBASIC18.96■□□□□ 0.63
TNFSF9P41273 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.96■□□□□ 0.63
TNFSF9P41273 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNFSF9P41273 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF9P41273 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.96■□□□□ 0.63
TNFSF9P41273 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF9P41273 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNFSF9P41273 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
TNFSF9P41273 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TNFSF9P41273 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFSF9P41273 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFSF9P41273 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TNFSF9P41273 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFSF9P41273 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
TNFSF9P41273 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 SIGLEC30P-201ENST00000455569 941 ntBASIC18.95■□□□□ 0.62
TNFSF9P41273 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFSF9P41273 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
TNFSF9P41273 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFSF9P41273 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.95■□□□□ 0.62
TNFSF9P41273 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.95■□□□□ 0.62
TNFSF9P41273 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TNFSF9P41273 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 AC046185.3-201ENST00000623228 1824 ntBASIC18.95■□□□□ 0.62
TNFSF9P41273 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF9P41273 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFSF9P41273 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFSF9P41273 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.94■□□□□ 0.62
TNFSF9P41273 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF9P41273 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.94■□□□□ 0.62
TNFSF9P41273 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.94■□□□□ 0.62
TNFSF9P41273 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFSF9P41273 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.94■□□□□ 0.62
TNFSF9P41273 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.94■□□□□ 0.62
TNFSF9P41273 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.94■□□□□ 0.62
TNFSF9P41273 AC107918.4-202ENST00000641623 219 ntBASIC18.94■□□□□ 0.62
TNFSF9P41273 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms