Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
USP8P40818 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.17■□□□□ 0.66
USP8P40818 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.17■□□□□ 0.66
USP8P40818 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.17■□□□□ 0.66
USP8P40818 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.17■□□□□ 0.66
USP8P40818 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.17■□□□□ 0.66
USP8P40818 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
USP8P40818 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.17■□□□□ 0.66
USP8P40818 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.17■□□□□ 0.66
USP8P40818 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 KRT8P47-201ENST00000604727 1398 ntBASIC19.17■□□□□ 0.66
USP8P40818 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.17■□□□□ 0.66
USP8P40818 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP8P40818 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
USP8P40818 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.16■□□□□ 0.66
USP8P40818 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.16■□□□□ 0.66
USP8P40818 AL645929.1-201ENST00000420084 975 ntBASIC19.16■□□□□ 0.66
USP8P40818 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.16■□□□□ 0.66
USP8P40818 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 AC112698.1-201ENST00000510299 916 ntBASIC19.16■□□□□ 0.66
USP8P40818 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.16■□□□□ 0.66
USP8P40818 AL390719.2-201ENST00000606993 987 ntBASIC19.16■□□□□ 0.66
USP8P40818 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.16■□□□□ 0.66
USP8P40818 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
USP8P40818 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP8P40818 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
USP8P40818 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
USP8P40818 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.15■□□□□ 0.66
USP8P40818 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.15■□□□□ 0.66
USP8P40818 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.15■□□□□ 0.66
USP8P40818 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.15■□□□□ 0.66
USP8P40818 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.15■□□□□ 0.66
USP8P40818 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.15■□□□□ 0.66
USP8P40818 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.15■□□□□ 0.66
USP8P40818 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
USP8P40818 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP8P40818 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.15■□□□□ 0.66
USP8P40818 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.15■□□□□ 0.66
USP8P40818 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
USP8P40818 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP8P40818 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP8P40818 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
USP8P40818 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP8P40818 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
USP8P40818 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP8P40818 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.14■□□□□ 0.65
USP8P40818 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP8P40818 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP8P40818 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.14■□□□□ 0.65
USP8P40818 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP8P40818 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.14■□□□□ 0.65
USP8P40818 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
USP8P40818 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
USP8P40818 NTF6B-201ENST00000591913 560 ntBASIC19.14■□□□□ 0.65
USP8P40818 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.14■□□□□ 0.65
USP8P40818 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.14■□□□□ 0.65
USP8P40818 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms