Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM23P36406 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM23P36406 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM23P36406 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM23P36406 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM23P36406 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM23P36406 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM23P36406 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM23P36406 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM23P36406 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM23P36406 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM23P36406 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM23P36406 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM23P36406 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM23P36406 AC018470.1-201ENST00000624790 3129 ntBASIC17.26■□□□□ 0.35
TRIM23P36406 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM23P36406 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM23P36406 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM23P36406 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM23P36406 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM23P36406 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRIM23P36406 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
TRIM23P36406 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM23P36406 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TRIM23P36406 PMS2P1-201ENST00000431037 1228 ntBASIC17.25■□□□□ 0.35
TRIM23P36406 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM23P36406 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM23P36406 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.25■□□□□ 0.35
TRIM23P36406 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 AL356488.2-201ENST00000602755 427 ntBASIC17.25■□□□□ 0.35
TRIM23P36406 PGM5P2-202ENST00000637225 1043 ntBASIC17.25■□□□□ 0.35
TRIM23P36406 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM23P36406 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM23P36406 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM23P36406 LINC00304-203ENST00000565008 1864 ntBASIC17.24■□□□□ 0.35
TRIM23P36406 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM23P36406 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TRIM23P36406 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM23P36406 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM23P36406 AC136632.2-201ENST00000512891 861 ntBASIC17.24■□□□□ 0.35
TRIM23P36406 RNA5SP415-201ENST00000517246 115 ntBASIC17.24■□□□□ 0.35
TRIM23P36406 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM23P36406 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM23P36406 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM23P36406 AC117500.6-201ENST00000624871 588 ntBASIC17.24■□□□□ 0.35
TRIM23P36406 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM23P36406 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM23P36406 ZNF259P1-201ENST00000407656 1365 ntBASIC17.24■□□□□ 0.35
TRIM23P36406 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM23P36406 NOC2LP1-202ENST00000452600 2235 ntBASIC17.24■□□□□ 0.35
TRIM23P36406 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TRIM23P36406 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM23P36406 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM23P36406 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM23P36406 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM23P36406 AC012317.2-201ENST00000623305 2251 ntBASIC17.23■□□□□ 0.35
TRIM23P36406 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM23P36406 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM23P36406 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM23P36406 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM23P36406 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM23P36406 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM23P36406 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM23P36406 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM23P36406 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM23P36406 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM23P36406 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM23P36406 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM23P36406 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM23P36406 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM23P36406 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM23P36406 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM23P36406 AC034105.1-201ENST00000563488 319 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms