Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.53■□□□□ 0.56
RFC1P35251 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC1P35251 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC1P35251 LTB4R2-202ENST00000528054 3092 ntBASIC18.53■□□□□ 0.56
RFC1P35251 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC1P35251 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC1P35251 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC1P35251 AP002414.4-201ENST00000589764 1148 ntBASIC18.53■□□□□ 0.56
RFC1P35251 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC1P35251 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.53■□□□□ 0.56
RFC1P35251 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 AC233702.3-201ENST00000578656 1387 ntBASIC18.53■□□□□ 0.56
RFC1P35251 SIRPAP1-201ENST00000448467 1770 ntBASIC18.53■□□□□ 0.56
RFC1P35251 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC1P35251 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RFC1P35251 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC1P35251 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC1P35251 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC1P35251 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RFC1P35251 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RFC1P35251 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC1P35251 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFC1P35251 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC1P35251 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC1P35251 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RFC1P35251 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.52■□□□□ 0.56
RFC1P35251 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RFC1P35251 AC091076.1-201ENST00000610741 619 ntBASIC18.52■□□□□ 0.56
RFC1P35251 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC1P35251 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.52■□□□□ 0.56
RFC1P35251 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC1P35251 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.52■□□□□ 0.56
RFC1P35251 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC1P35251 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC1P35251 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFC1P35251 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC1P35251 CROCCP2-202ENST00000412962 2773 ntBASIC18.52■□□□□ 0.55
RFC1P35251 AC106820.2-201ENST00000563775 3264 ntBASIC18.52■□□□□ 0.55
RFC1P35251 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC1P35251 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC1P35251 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 NFIC-211ENST00000641145 8399 ntBASIC18.51■□□□□ 0.55
RFC1P35251 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.51■□□□□ 0.55
RFC1P35251 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RFC1P35251 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
RFC1P35251 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.51■□□□□ 0.55
RFC1P35251 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.51■□□□□ 0.55
RFC1P35251 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC1P35251 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC1P35251 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC1P35251 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.51■□□□□ 0.55
RFC1P35251 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 MIR3180-1-201ENST00000580374 94 ntBASIC18.51■□□□□ 0.55
RFC1P35251 MIR3180-3-201ENST00000584616 94 ntBASIC18.51■□□□□ 0.55
RFC1P35251 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC1P35251 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RFC1P35251 NPAP1P7-201ENST00000613027 823 ntBASIC18.51■□□□□ 0.55
RFC1P35251 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.51■□□□□ 0.55
RFC1P35251 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RFC1P35251 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.51■□□□□ 0.55
RFC1P35251 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC1P35251 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC1P35251 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC1P35251 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC1P35251 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RFC1P35251 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.5■□□□□ 0.55
RFC1P35251 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RFC1P35251 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 TOB2P1-201ENST00000469761 992 ntBASIC18.5■□□□□ 0.55
RFC1P35251 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RFC1P35251 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.5■□□□□ 0.55
RFC1P35251 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.5■□□□□ 0.55
RFC1P35251 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms