Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCD1P33897 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ABCD1P33897 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.19■□□□□ 0.66
ABCD1P33897 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCD1P33897 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ABCD1P33897 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ABCD1P33897 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
ABCD1P33897 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.18■□□□□ 0.66
ABCD1P33897 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ABCD1P33897 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ABCD1P33897 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCD1P33897 LYSMD4-203ENST00000378904 2122 ntBASIC19.18■□□□□ 0.66
ABCD1P33897 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 AKR1C7P-201ENST00000305623 895 ntBASIC19.18■□□□□ 0.66
ABCD1P33897 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.18■□□□□ 0.66
ABCD1P33897 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.18■□□□□ 0.66
ABCD1P33897 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCD1P33897 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 FGFR3P6-201ENST00000457012 610 ntBASIC19.18■□□□□ 0.66
ABCD1P33897 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.18■□□□□ 0.66
ABCD1P33897 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 RN7SL510P-201ENST00000581311 263 ntBASIC19.18■□□□□ 0.66
ABCD1P33897 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 AL022326.1-202ENST00000641533 845 ntBASIC19.18■□□□□ 0.66
ABCD1P33897 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCD1P33897 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCD1P33897 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCD1P33897 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCD1P33897 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCD1P33897 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ABCD1P33897 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.17■□□□□ 0.66
ABCD1P33897 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCD1P33897 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCD1P33897 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCD1P33897 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCD1P33897 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ABCD1P33897 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ABCD1P33897 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
ABCD1P33897 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCD1P33897 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.17■□□□□ 0.66
ABCD1P33897 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.17■□□□□ 0.66
ABCD1P33897 UNC93B7-201ENST00000509439 705 ntBASIC19.17■□□□□ 0.66
ABCD1P33897 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.17■□□□□ 0.66
ABCD1P33897 AL121912.1-201ENST00000603683 238 ntBASIC19.17■□□□□ 0.66
ABCD1P33897 AC064862.7-201ENST00000604520 867 ntBASIC19.17■□□□□ 0.66
ABCD1P33897 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCD1P33897 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCD1P33897 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCD1P33897 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
ABCD1P33897 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ABCD1P33897 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.16■□□□□ 0.66
ABCD1P33897 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.16■□□□□ 0.66
ABCD1P33897 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.16■□□□□ 0.66
ABCD1P33897 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.16■□□□□ 0.66
ABCD1P33897 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.16■□□□□ 0.66
ABCD1P33897 AF238378.1-201ENST00000526806 358 ntBASIC19.16■□□□□ 0.66
ABCD1P33897 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.16■□□□□ 0.66
ABCD1P33897 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.16■□□□□ 0.66
ABCD1P33897 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.16■□□□□ 0.66
ABCD1P33897 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.16■□□□□ 0.66
ABCD1P33897 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ABCD1P33897 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.16■□□□□ 0.66
ABCD1P33897 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCD1P33897 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.16■□□□□ 0.66
ABCD1P33897 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCD1P33897 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.15■□□□□ 0.66
ABCD1P33897 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ABCD1P33897 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ABCD1P33897 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCD1P33897 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCD1P33897 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCD1P33897 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCD1P33897 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.15■□□□□ 0.66
ABCD1P33897 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCD1P33897 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ABCD1P33897 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCD1P33897 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCD1P33897 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCD1P33897 ACTG1P4-201ENST00000425123 1122 ntBASIC19.15■□□□□ 0.66
ABCD1P33897 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms