Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
EPHA3P29320 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA3P29320 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
EPHA3P29320 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
EPHA3P29320 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
EPHA3P29320 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EPHA3P29320 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.1■□□□□ 0.33
EPHA3P29320 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
EPHA3P29320 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 AC079328.2-201ENST00000561241 3354 ntBASIC17.1■□□□□ 0.33
EPHA3P29320 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
EPHA3P29320 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.1■□□□□ 0.33
EPHA3P29320 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.1■□□□□ 0.33
EPHA3P29320 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.1■□□□□ 0.33
EPHA3P29320 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
EPHA3P29320 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.1■□□□□ 0.33
EPHA3P29320 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.1■□□□□ 0.33
EPHA3P29320 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.1■□□□□ 0.33
EPHA3P29320 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.1■□□□□ 0.33
EPHA3P29320 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.1■□□□□ 0.33
EPHA3P29320 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.1■□□□□ 0.33
EPHA3P29320 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 BX276092.7-203ENST00000637198 1536 ntBASIC17.1■□□□□ 0.33
EPHA3P29320 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
EPHA3P29320 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.1■□□□□ 0.33
EPHA3P29320 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA3P29320 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.09■□□□□ 0.33
EPHA3P29320 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
EPHA3P29320 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.09■□□□□ 0.33
EPHA3P29320 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.09■□□□□ 0.33
EPHA3P29320 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.09■□□□□ 0.33
EPHA3P29320 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.09■□□□□ 0.33
EPHA3P29320 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.09■□□□□ 0.33
EPHA3P29320 AL512604.3-201ENST00000569583 964 ntBASIC17.09■□□□□ 0.33
EPHA3P29320 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
EPHA3P29320 FAM87A-204ENST00000613235 858 ntBASIC17.09■□□□□ 0.33
EPHA3P29320 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EPHA3P29320 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 KRT8P9-201ENST00000558927 1449 ntBASIC17.09■□□□□ 0.33
EPHA3P29320 LINC01311-201ENST00000565162 1445 ntBASIC17.09■□□□□ 0.33
EPHA3P29320 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EPHA3P29320 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
EPHA3P29320 AC046185.3-201ENST00000623228 1824 ntBASIC17.09■□□□□ 0.33
EPHA3P29320 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA3P29320 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
EPHA3P29320 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
EPHA3P29320 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
EPHA3P29320 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
EPHA3P29320 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.08■□□□□ 0.33
EPHA3P29320 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
EPHA3P29320 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
EPHA3P29320 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
EPHA3P29320 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.08■□□□□ 0.32
EPHA3P29320 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA3P29320 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA3P29320 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms