Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
COL8A2P25067 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
COL8A2P25067 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 NOC2LP2-201ENST00000407594 1944 ntBASIC14.84□□□□□ -0.03
COL8A2P25067 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.84□□□□□ -0.03
COL8A2P25067 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.84□□□□□ -0.03
COL8A2P25067 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
COL8A2P25067 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
COL8A2P25067 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
COL8A2P25067 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
COL8A2P25067 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.83□□□□□ -0.03
COL8A2P25067 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
COL8A2P25067 HTR7P1-202ENST00000624664 4411 ntBASIC14.83□□□□□ -0.03
COL8A2P25067 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
COL8A2P25067 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.83□□□□□ -0.04
COL8A2P25067 AC138028.4-201ENST00000564984 1845 ntBASIC14.83□□□□□ -0.04
COL8A2P25067 BX276092.7-203ENST00000637198 1536 ntBASIC14.83□□□□□ -0.04
COL8A2P25067 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
COL8A2P25067 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.83□□□□□ -0.04
COL8A2P25067 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.83□□□□□ -0.04
COL8A2P25067 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.83□□□□□ -0.04
COL8A2P25067 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 AC012640.2-201ENST00000561606 901 ntBASIC14.83□□□□□ -0.04
COL8A2P25067 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.83□□□□□ -0.04
COL8A2P25067 AC109462.3-201ENST00000573934 613 ntBASIC14.83□□□□□ -0.04
COL8A2P25067 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
COL8A2P25067 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
COL8A2P25067 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL8A2P25067 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
COL8A2P25067 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 KRT18P55-202ENST00000578578 1546 ntBASIC14.82□□□□□ -0.04
COL8A2P25067 ABALON-201ENST00000629058 1903 ntBASIC14.82□□□□□ -0.04
COL8A2P25067 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
COL8A2P25067 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.82□□□□□ -0.04
COL8A2P25067 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.82□□□□□ -0.04
COL8A2P25067 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.82□□□□□ -0.04
COL8A2P25067 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.82□□□□□ -0.04
COL8A2P25067 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.82□□□□□ -0.04
COL8A2P25067 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.82□□□□□ -0.04
COL8A2P25067 DDX43P3-201ENST00000441064 443 ntBASIC14.82□□□□□ -0.04
COL8A2P25067 RPL13AP23-201ENST00000480739 586 ntBASIC14.82□□□□□ -0.04
COL8A2P25067 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.82□□□□□ -0.04
COL8A2P25067 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.82□□□□□ -0.04
COL8A2P25067 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.82□□□□□ -0.04
COL8A2P25067 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.82□□□□□ -0.04
COL8A2P25067 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.82□□□□□ -0.04
COL8A2P25067 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.82□□□□□ -0.04
COL8A2P25067 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.82□□□□□ -0.04
COL8A2P25067 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 AC139713.2-201ENST00000641328 2723 ntBASIC14.82□□□□□ -0.04
COL8A2P25067 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL8A2P25067 AL353593.2-201ENST00000602529 1483 ntBASIC14.82□□□□□ -0.04
COL8A2P25067 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms