Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP11P24347 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
MMP11P24347 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP11P24347 FAM220CP-201ENST00000395253 831 ntBASIC16.68■□□□□ 0.26
MMP11P24347 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 AL031284.1-201ENST00000419297 478 ntBASIC16.68■□□□□ 0.26
MMP11P24347 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP11P24347 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MMP11P24347 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 AC073648.2-201ENST00000510116 352 ntBASIC16.68■□□□□ 0.26
MMP11P24347 RNA5SP419-201ENST00000515908 135 ntBASIC16.68■□□□□ 0.26
MMP11P24347 DUTP2-201ENST00000519164 463 ntBASIC16.68■□□□□ 0.26
MMP11P24347 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP11P24347 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP11P24347 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MMP11P24347 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP11P24347 AC006116.8-202ENST00000587620 1550 ntBASIC16.68■□□□□ 0.26
MMP11P24347 AC022898.2-201ENST00000616822 1312 ntBASIC16.68■□□□□ 0.26
MMP11P24347 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP11P24347 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP11P24347 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MMP11P24347 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP11P24347 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MMP11P24347 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP11P24347 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP11P24347 AC018712.1-201ENST00000455767 687 ntBASIC16.67■□□□□ 0.26
MMP11P24347 RNPS1P1-201ENST00000507437 918 ntBASIC16.67■□□□□ 0.26
MMP11P24347 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP11P24347 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP11P24347 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MMP11P24347 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MMP11P24347 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP11P24347 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP11P24347 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP11P24347 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MMP11P24347 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP11P24347 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MMP11P24347 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MMP11P24347 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MMP11P24347 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MMP11P24347 AL645608.8-201ENST00000606034 2086 ntBASIC16.66■□□□□ 0.26
MMP11P24347 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP11P24347 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MMP11P24347 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP11P24347 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.66■□□□□ 0.26
MMP11P24347 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 AL590627.1-203ENST00000421194 1026 ntBASIC16.66■□□□□ 0.26
MMP11P24347 AC096633.1-201ENST00000422446 749 ntBASIC16.66■□□□□ 0.26
MMP11P24347 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 AC093909.1-201ENST00000504731 1122 ntBASIC16.66■□□□□ 0.26
MMP11P24347 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP11P24347 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MMP11P24347 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP11P24347 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP11P24347 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.66■□□□□ 0.26
MMP11P24347 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP11P24347 AC120114.3-201ENST00000611923 658 ntBASIC16.66■□□□□ 0.26
MMP11P24347 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MMP11P24347 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms