Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCFC2P16383 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCFC2P16383 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.83■□□□□ 0.76
GCFC2P16383 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
GCFC2P16383 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCFC2P16383 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GCFC2P16383 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
GCFC2P16383 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GCFC2P16383 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.76
GCFC2P16383 AC046185.3-201ENST00000623228 1824 ntBASIC19.83■□□□□ 0.76
GCFC2P16383 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCFC2P16383 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.83■□□□□ 0.76
GCFC2P16383 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
GCFC2P16383 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCFC2P16383 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.83■□□□□ 0.76
GCFC2P16383 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCFC2P16383 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.83■□□□□ 0.76
GCFC2P16383 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.82■□□□□ 0.76
GCFC2P16383 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.82■□□□□ 0.76
GCFC2P16383 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.82■□□□□ 0.76
GCFC2P16383 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.82■□□□□ 0.76
GCFC2P16383 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.82■□□□□ 0.76
GCFC2P16383 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.82■□□□□ 0.76
GCFC2P16383 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
GCFC2P16383 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.82■□□□□ 0.76
GCFC2P16383 AL356309.3-201ENST00000624132 1934 ntBASIC19.82■□□□□ 0.76
GCFC2P16383 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCFC2P16383 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
GCFC2P16383 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.81■□□□□ 0.76
GCFC2P16383 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.81■□□□□ 0.76
GCFC2P16383 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GCFC2P16383 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.81■□□□□ 0.76
GCFC2P16383 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.81■□□□□ 0.76
GCFC2P16383 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.81■□□□□ 0.76
GCFC2P16383 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
GCFC2P16383 SIGLEC30P-201ENST00000455569 941 ntBASIC19.81■□□□□ 0.76
GCFC2P16383 EMBP1-201ENST00000458200 901 ntBASIC19.81■□□□□ 0.76
GCFC2P16383 SCARNA2-201ENST00000458748 420 ntBASIC19.81■□□□□ 0.76
GCFC2P16383 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GCFC2P16383 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.81■□□□□ 0.76
GCFC2P16383 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GCFC2P16383 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
GCFC2P16383 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.81■□□□□ 0.76
GCFC2P16383 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCFC2P16383 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.8■□□□□ 0.76
GCFC2P16383 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.8■□□□□ 0.76
GCFC2P16383 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
GCFC2P16383 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.8■□□□□ 0.76
GCFC2P16383 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 PRYP5-201ENST00000451909 266 ntBASIC19.8■□□□□ 0.76
GCFC2P16383 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.8■□□□□ 0.76
GCFC2P16383 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.8■□□□□ 0.76
GCFC2P16383 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.8■□□□□ 0.76
GCFC2P16383 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCFC2P16383 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
GCFC2P16383 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCFC2P16383 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCFC2P16383 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCFC2P16383 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCFC2P16383 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GCFC2P16383 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.79■□□□□ 0.76
GCFC2P16383 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms