Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM1P09493 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM1P09493 AL391005.1-201ENST00000623953 2435 ntBASIC19.37■□□□□ 0.69
TPM1P09493 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TPM1P09493 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM1P09493 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM1P09493 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM1P09493 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM1P09493 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TPM1P09493 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM1P09493 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TPM1P09493 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPM1P09493 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.37■□□□□ 0.69
TPM1P09493 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM1P09493 MIR3917-201ENST00000580971 93 ntBASIC19.37■□□□□ 0.69
TPM1P09493 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM1P09493 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.37■□□□□ 0.69
TPM1P09493 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM1P09493 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM1P09493 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM1P09493 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TPM1P09493 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TPM1P09493 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM1P09493 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM1P09493 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TPM1P09493 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 AC016396.2-201ENST00000562575 1417 ntBASIC19.36■□□□□ 0.69
TPM1P09493 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM1P09493 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
TPM1P09493 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TPM1P09493 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.36■□□□□ 0.69
TPM1P09493 PVRIG2P-201ENST00000435460 978 ntBASIC19.36■□□□□ 0.69
TPM1P09493 AC128688.1-201ENST00000487626 519 ntBASIC19.36■□□□□ 0.69
TPM1P09493 AC113404.2-201ENST00000507884 177 ntBASIC19.36■□□□□ 0.69
TPM1P09493 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM1P09493 AP000525.1-201ENST00000608286 694 ntBASIC19.36■□□□□ 0.69
TPM1P09493 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM1P09493 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TPM1P09493 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
TPM1P09493 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM1P09493 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TPM1P09493 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM1P09493 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TPM1P09493 PRORSD1P-201ENST00000295112 541 ntBASIC19.35■□□□□ 0.69
TPM1P09493 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 KRT18P65-201ENST00000439811 1286 ntBASIC19.35■□□□□ 0.69
TPM1P09493 AC009947.2-201ENST00000444014 672 ntBASIC19.35■□□□□ 0.69
TPM1P09493 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.35■□□□□ 0.69
TPM1P09493 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM1P09493 MIR4785-201ENST00000585005 73 ntBASIC19.35■□□□□ 0.69
TPM1P09493 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TPM1P09493 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TPM1P09493 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM1P09493 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM1P09493 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TPM1P09493 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms