Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.06■□□□□ 0.96
CHGBP05060 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.06■□□□□ 0.96
CHGBP05060 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.06■□□□□ 0.96
CHGBP05060 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.06■□□□□ 0.96
CHGBP05060 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.06■□□□□ 0.96
CHGBP05060 MTDHP4-201ENST00000600287 670 ntBASIC21.06■□□□□ 0.96
CHGBP05060 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.06■□□□□ 0.96
CHGBP05060 AL139327.4-201ENST00000612362 153 ntBASIC21.06■□□□□ 0.96
CHGBP05060 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGBP05060 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHGBP05060 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGBP05060 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGBP05060 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
CHGBP05060 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGBP05060 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGBP05060 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGBP05060 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGBP05060 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGBP05060 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CHGBP05060 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGBP05060 KRT18P67-201ENST00000432816 1264 ntBASIC21.05■□□□□ 0.96
CHGBP05060 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CHGBP05060 AP000347.1-202ENST00000435868 847 ntBASIC21.05■□□□□ 0.96
CHGBP05060 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGBP05060 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGBP05060 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.05■□□□□ 0.96
CHGBP05060 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.05■□□□□ 0.96
CHGBP05060 FAM215A-202ENST00000632077 792 ntBASIC21.05■□□□□ 0.96
CHGBP05060 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CHGBP05060 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGBP05060 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.05■□□□□ 0.96
CHGBP05060 AC243591.1-201ENST00000452967 1364 ntBASIC21.05■□□□□ 0.96
CHGBP05060 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGBP05060 CROCCP2-202ENST00000412962 2773 ntBASIC21.05■□□□□ 0.96
CHGBP05060 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CHGBP05060 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGBP05060 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGBP05060 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CHGBP05060 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CHGBP05060 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CHGBP05060 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.04■□□□□ 0.96
CHGBP05060 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHGBP05060 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.04■□□□□ 0.96
CHGBP05060 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.04■□□□□ 0.96
CHGBP05060 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHGBP05060 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHGBP05060 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.04■□□□□ 0.96
CHGBP05060 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.04■□□□□ 0.96
CHGBP05060 STK19B-204ENST00000512515 211 ntBASIC21.04■□□□□ 0.96
CHGBP05060 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.04■□□□□ 0.96
CHGBP05060 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.04■□□□□ 0.96
CHGBP05060 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.04■□□□□ 0.96
CHGBP05060 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.04■□□□□ 0.96
CHGBP05060 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.04■□□□□ 0.96
CHGBP05060 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.04■□□□□ 0.96
CHGBP05060 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHGBP05060 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.04■□□□□ 0.96
CHGBP05060 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHGBP05060 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHGBP05060 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHGBP05060 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHGBP05060 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.03■□□□□ 0.96
CHGBP05060 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHGBP05060 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHGBP05060 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CHGBP05060 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHGBP05060 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CHGBP05060 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.03■□□□□ 0.96
CHGBP05060 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHGBP05060 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.03■□□□□ 0.96
CHGBP05060 AL020989.1-201ENST00000422979 469 ntBASIC21.03■□□□□ 0.96
CHGBP05060 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CHGBP05060 AC079776.4-201ENST00000511039 504 ntBASIC21.03■□□□□ 0.96
CHGBP05060 IGHV3-52-201ENST00000519770 353 ntBASIC21.03■□□□□ 0.96
CHGBP05060 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.03■□□□□ 0.96
CHGBP05060 AL139288.1-201ENST00000623748 933 ntBASIC21.03■□□□□ 0.96
CHGBP05060 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHGBP05060 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHGBP05060 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms