Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.51■□□□□ 0.39
PDGFBP01127 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDGFBP01127 AC004890.2-204ENST00000481968 304 ntBASIC17.51■□□□□ 0.39
PDGFBP01127 DUTP2-201ENST00000519164 463 ntBASIC17.51■□□□□ 0.39
PDGFBP01127 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.51■□□□□ 0.39
PDGFBP01127 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.51■□□□□ 0.39
PDGFBP01127 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.51■□□□□ 0.39
PDGFBP01127 RARRES2P8-201ENST00000566335 367 ntBASIC17.51■□□□□ 0.39
PDGFBP01127 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.51■□□□□ 0.39
PDGFBP01127 MIR6080-201ENST00000617359 66 ntBASIC17.51■□□□□ 0.39
PDGFBP01127 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDGFBP01127 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.51■□□□□ 0.39
PDGFBP01127 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PDGFBP01127 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDGFBP01127 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFBP01127 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.5■□□□□ 0.39
PDGFBP01127 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.5■□□□□ 0.39
PDGFBP01127 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.5■□□□□ 0.39
PDGFBP01127 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PDGFBP01127 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.5■□□□□ 0.39
PDGFBP01127 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.5■□□□□ 0.39
PDGFBP01127 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 KRT17P7-201ENST00000451704 1104 ntBASIC17.5■□□□□ 0.39
PDGFBP01127 IGHV3-52-201ENST00000519770 353 ntBASIC17.5■□□□□ 0.39
PDGFBP01127 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.5■□□□□ 0.39
PDGFBP01127 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.5■□□□□ 0.39
PDGFBP01127 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PDGFBP01127 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.5■□□□□ 0.39
PDGFBP01127 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.5■□□□□ 0.39
PDGFBP01127 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.5■□□□□ 0.39
PDGFBP01127 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFBP01127 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PDGFBP01127 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDGFBP01127 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PDGFBP01127 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 SPDYE7P-202ENST00000420373 878 ntBASIC17.49■□□□□ 0.39
PDGFBP01127 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDGFBP01127 IGHV3-62-201ENST00000520057 340 ntBASIC17.49■□□□□ 0.39
PDGFBP01127 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PDGFBP01127 HILS1-202ENST00000545329 423 ntBASIC17.49■□□□□ 0.39
PDGFBP01127 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 LINC01225-203ENST00000563550 1244 ntBASIC17.49■□□□□ 0.39
PDGFBP01127 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.49■□□□□ 0.39
PDGFBP01127 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.49■□□□□ 0.39
PDGFBP01127 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PDGFBP01127 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFBP01127 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFBP01127 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFBP01127 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.48■□□□□ 0.39
PDGFBP01127 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFBP01127 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PDGFBP01127 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFBP01127 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PDGFBP01127 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
PDGFBP01127 AFG3L1P-217ENST00000557444 2447 ntBASIC17.48■□□□□ 0.39
PDGFBP01127 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFBP01127 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFBP01127 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFBP01127 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFBP01127 ANO7L1-203ENST00000602586 1720 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms