Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC008608.2-201ENST00000606089 416 ntBASIC18.02■□□□□ 0.48
MT-CO1P00395 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.02■□□□□ 0.48
MT-CO1P00395 TP73-AS1-207ENST00000624167 988 ntBASIC18.02■□□□□ 0.48
MT-CO1P00395 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.02■□□□□ 0.48
MT-CO1P00395 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.02■□□□□ 0.48
MT-CO1P00395 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MT-CO1P00395 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MT-CO1P00395 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.02■□□□□ 0.47
MT-CO1P00395 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.02■□□□□ 0.47
MT-CO1P00395 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
MT-CO1P00395 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
MT-CO1P00395 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
MT-CO1P00395 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MT-CO1P00395 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-CO1P00395 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
MT-CO1P00395 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-CO1P00395 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
MT-CO1P00395 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
MT-CO1P00395 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-CO1P00395 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-CO1P00395 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
MT-CO1P00395 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-CO1P00395 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.01■□□□□ 0.47
MT-CO1P00395 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-CO1P00395 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-CO1P00395 AL355877.3-201ENST00000622820 899 ntBASIC18.01■□□□□ 0.47
MT-CO1P00395 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MT-CO1P00395 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.01■□□□□ 0.47
MT-CO1P00395 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-CO1P00395 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-CO1P00395 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO1P00395 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18■□□□□ 0.47
MT-CO1P00395 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18■□□□□ 0.47
MT-CO1P00395 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18■□□□□ 0.47
MT-CO1P00395 MRPL3P1-201ENST00000400109 1033 ntBASIC18■□□□□ 0.47
MT-CO1P00395 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18■□□□□ 0.47
MT-CO1P00395 FGFR3P6-201ENST00000457012 610 ntBASIC18■□□□□ 0.47
MT-CO1P00395 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MT-CO1P00395 AC122714.2-201ENST00000502787 707 ntBASIC18■□□□□ 0.47
MT-CO1P00395 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 MNT-208ENST00000575394 606 ntTSL 4 BASIC18■□□□□ 0.47
MT-CO1P00395 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18■□□□□ 0.47
MT-CO1P00395 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18■□□□□ 0.47
MT-CO1P00395 AC116407.2-201ENST00000613639 860 ntBASIC18■□□□□ 0.47
MT-CO1P00395 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18■□□□□ 0.47
MT-CO1P00395 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MT-CO1P00395 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MT-CO1P00395 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18■□□□□ 0.47
MT-CO1P00395 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MT-CO1P00395 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO1P00395 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
MT-CO1P00395 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
MT-CO1P00395 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
MT-CO1P00395 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
MT-CO1P00395 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.99■□□□□ 0.47
MT-CO1P00395 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.99■□□□□ 0.47
MT-CO1P00395 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.99■□□□□ 0.47
MT-CO1P00395 AP000867.4-201ENST00000641616 219 ntBASIC17.99■□□□□ 0.47
MT-CO1P00395 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
MT-CO1P00395 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO1P00395 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms