Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCA1O95477 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.72□□□□□ -0.05
ABCA1O95477 AC096633.1-201ENST00000422446 749 ntBASIC14.72□□□□□ -0.05
ABCA1O95477 ALG1L5P-201ENST00000482043 771 ntBASIC14.72□□□□□ -0.05
ABCA1O95477 AC112698.1-201ENST00000510299 916 ntBASIC14.72□□□□□ -0.05
ABCA1O95477 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ABCA1O95477 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.72□□□□□ -0.05
ABCA1O95477 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ABCA1O95477 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.71□□□□□ -0.05
ABCA1O95477 AL031598.1-201ENST00000561511 1773 ntBASIC14.71□□□□□ -0.05
ABCA1O95477 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ABCA1O95477 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.71□□□□□ -0.05
ABCA1O95477 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.71□□□□□ -0.05
ABCA1O95477 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ABCA1O95477 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.71□□□□□ -0.05
ABCA1O95477 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.71□□□□□ -0.05
ABCA1O95477 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
ABCA1O95477 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.71□□□□□ -0.05
ABCA1O95477 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.71□□□□□ -0.05
ABCA1O95477 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.71□□□□□ -0.05
ABCA1O95477 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ABCA1O95477 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ABCA1O95477 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ABCA1O95477 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ABCA1O95477 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
ABCA1O95477 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
ABCA1O95477 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
ABCA1O95477 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
ABCA1O95477 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ABCA1O95477 HCG4B-203ENST00000450128 991 ntBASIC14.71□□□□□ -0.06
ABCA1O95477 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ABCA1O95477 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ABCA1O95477 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.71□□□□□ -0.06
ABCA1O95477 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.71□□□□□ -0.06
ABCA1O95477 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.71□□□□□ -0.06
ABCA1O95477 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ABCA1O95477 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCA1O95477 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.7□□□□□ -0.06
ABCA1O95477 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCA1O95477 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCA1O95477 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCA1O95477 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.7□□□□□ -0.06
ABCA1O95477 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCA1O95477 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 RFPL4AP1-201ENST00000530883 850 ntBASIC14.7□□□□□ -0.06
ABCA1O95477 AC092865.6-201ENST00000642101 219 ntBASIC14.7□□□□□ -0.06
ABCA1O95477 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ABCA1O95477 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA1O95477 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCA1O95477 PMPCAP1-201ENST00000508114 1576 ntBASIC14.7□□□□□ -0.06
ABCA1O95477 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA1O95477 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ABCA1O95477 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA1O95477 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms