Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
BEST1O76090 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.4■□□□□ 0.54
BEST1O76090 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.4■□□□□ 0.54
BEST1O76090 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.4■□□□□ 0.54
BEST1O76090 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.4■□□□□ 0.54
BEST1O76090 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.4■□□□□ 0.54
BEST1O76090 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
BEST1O76090 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.4■□□□□ 0.54
BEST1O76090 SIGLEC30P-201ENST00000455569 941 ntBASIC18.4■□□□□ 0.54
BEST1O76090 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.4■□□□□ 0.54
BEST1O76090 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.4■□□□□ 0.54
BEST1O76090 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
BEST1O76090 AC107918.4-202ENST00000641623 219 ntBASIC18.4■□□□□ 0.54
BEST1O76090 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.4■□□□□ 0.54
BEST1O76090 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
BEST1O76090 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
BEST1O76090 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
BEST1O76090 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.4■□□□□ 0.54
BEST1O76090 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
BEST1O76090 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
BEST1O76090 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BEST1O76090 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BEST1O76090 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BEST1O76090 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BEST1O76090 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST1O76090 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST1O76090 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST1O76090 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BEST1O76090 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST1O76090 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.39■□□□□ 0.53
BEST1O76090 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.39■□□□□ 0.53
BEST1O76090 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST1O76090 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST1O76090 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.39■□□□□ 0.53
BEST1O76090 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BEST1O76090 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST1O76090 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST1O76090 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BEST1O76090 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST1O76090 AC046185.3-201ENST00000623228 1824 ntBASIC18.39■□□□□ 0.53
BEST1O76090 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST1O76090 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BEST1O76090 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST1O76090 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
BEST1O76090 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST1O76090 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST1O76090 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST1O76090 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
BEST1O76090 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST1O76090 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST1O76090 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BEST1O76090 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
BEST1O76090 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.38■□□□□ 0.53
BEST1O76090 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST1O76090 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.38■□□□□ 0.53
BEST1O76090 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.38■□□□□ 0.53
BEST1O76090 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.38■□□□□ 0.53
BEST1O76090 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST1O76090 AC116407.3-201ENST00000623905 1129 ntBASIC18.38■□□□□ 0.53
BEST1O76090 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BEST1O76090 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BEST1O76090 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST1O76090 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST1O76090 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST1O76090 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST1O76090 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST1O76090 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST1O76090 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST1O76090 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BEST1O76090 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST1O76090 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST1O76090 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST1O76090 AP000347.1-202ENST00000435868 847 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms