Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 AC021087.4-201ENST00000563761 564 ntBASIC16.84■□□□□ 0.29
PRICKLE3O43900 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRICKLE3O43900 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.84■□□□□ 0.29
PRICKLE3O43900 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRICKLE3O43900 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRICKLE3O43900 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PRICKLE3O43900 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
PRICKLE3O43900 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PRICKLE3O43900 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.83■□□□□ 0.28
PRICKLE3O43900 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.83■□□□□ 0.28
PRICKLE3O43900 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PRICKLE3O43900 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.83■□□□□ 0.28
PRICKLE3O43900 SCARNA2-201ENST00000458748 420 ntBASIC16.83■□□□□ 0.28
PRICKLE3O43900 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PRICKLE3O43900 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PRICKLE3O43900 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PRICKLE3O43900 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 AC004817.3-201ENST00000602957 2129 ntBASIC16.83■□□□□ 0.28
PRICKLE3O43900 LINC00896-202ENST00000609602 2128 ntBASIC16.83■□□□□ 0.28
PRICKLE3O43900 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRICKLE3O43900 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRICKLE3O43900 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRICKLE3O43900 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRICKLE3O43900 AL138688.1-201ENST00000624851 1594 ntBASIC16.82■□□□□ 0.28
PRICKLE3O43900 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRICKLE3O43900 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRICKLE3O43900 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRICKLE3O43900 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRICKLE3O43900 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.82■□□□□ 0.28
PRICKLE3O43900 FAM197Y8-203ENST00000450145 560 ntBASIC16.82■□□□□ 0.28
PRICKLE3O43900 AC018712.1-201ENST00000455767 687 ntBASIC16.82■□□□□ 0.28
PRICKLE3O43900 BX005266.1-201ENST00000473402 457 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms