Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC28A2O43868 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SLC28A2O43868 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC28A2O43868 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SLC28A2O43868 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC28A2O43868 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC28A2O43868 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC28A2O43868 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.95■□□□□ 0.3
SLC28A2O43868 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC28A2O43868 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SLC28A2O43868 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC28A2O43868 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.95■□□□□ 0.3
SLC28A2O43868 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.95■□□□□ 0.3
SLC28A2O43868 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.95■□□□□ 0.3
SLC28A2O43868 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
SLC28A2O43868 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.95■□□□□ 0.3
SLC28A2O43868 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC28A2O43868 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 LINC00896-202ENST00000609602 2128 ntBASIC16.95■□□□□ 0.3
SLC28A2O43868 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC28A2O43868 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
SLC28A2O43868 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC28A2O43868 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC28A2O43868 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A2O43868 AL024508.2-201ENST00000607749 1894 ntBASIC16.95■□□□□ 0.3
SLC28A2O43868 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A2O43868 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
SLC28A2O43868 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC28A2O43868 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC28A2O43868 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC28A2O43868 RPSAP43-201ENST00000402237 625 ntBASIC16.94■□□□□ 0.3
SLC28A2O43868 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 HTR5BP-201ENST00000430851 1154 ntBASIC16.94■□□□□ 0.3
SLC28A2O43868 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC28A2O43868 AC004967.1-201ENST00000453589 447 ntBASIC16.94■□□□□ 0.3
SLC28A2O43868 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC28A2O43868 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 AL049840.3-201ENST00000602669 611 ntBASIC16.94■□□□□ 0.3
SLC28A2O43868 AL390719.2-201ENST00000606993 987 ntBASIC16.94■□□□□ 0.3
SLC28A2O43868 MIR7706-201ENST00000613747 67 ntBASIC16.94■□□□□ 0.3
SLC28A2O43868 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC28A2O43868 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SLC28A2O43868 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A2O43868 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SLC28A2O43868 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms