Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.78■□□□□ 0.6
SPTLC1O15269 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SPTLC1O15269 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.78■□□□□ 0.6
SPTLC1O15269 AC107918.4-202ENST00000641623 219 ntBASIC18.78■□□□□ 0.6
SPTLC1O15269 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SPTLC1O15269 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTLC1O15269 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTLC1O15269 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTLC1O15269 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
SPTLC1O15269 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SPTLC1O15269 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SPTLC1O15269 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 AC003669.1-201ENST00000334569 611 ntBASIC18.77■□□□□ 0.6
SPTLC1O15269 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPTLC1O15269 KLF4P1-201ENST00000412782 1185 ntBASIC18.77■□□□□ 0.6
SPTLC1O15269 BX842568.4-201ENST00000421222 227 ntBASIC18.77■□□□□ 0.6
SPTLC1O15269 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.77■□□□□ 0.6
SPTLC1O15269 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.77■□□□□ 0.6
SPTLC1O15269 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.77■□□□□ 0.6
SPTLC1O15269 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.77■□□□□ 0.6
SPTLC1O15269 AC139887.3-201ENST00000568585 713 ntBASIC18.77■□□□□ 0.6
SPTLC1O15269 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.77■□□□□ 0.6
SPTLC1O15269 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SPTLC1O15269 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SPTLC1O15269 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
SPTLC1O15269 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPTLC1O15269 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPTLC1O15269 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SPTLC1O15269 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPTLC1O15269 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SPTLC1O15269 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.76■□□□□ 0.59
SPTLC1O15269 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.76■□□□□ 0.59
SPTLC1O15269 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.76■□□□□ 0.59
SPTLC1O15269 SLC25A6P5-201ENST00000435663 894 ntBASIC18.76■□□□□ 0.59
SPTLC1O15269 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SPTLC1O15269 IGHV3-52-201ENST00000519770 353 ntBASIC18.76■□□□□ 0.59
SPTLC1O15269 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.76■□□□□ 0.59
SPTLC1O15269 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.76■□□□□ 0.59
SPTLC1O15269 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.76■□□□□ 0.59
SPTLC1O15269 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.76■□□□□ 0.59
SPTLC1O15269 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SPTLC1O15269 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.76■□□□□ 0.59
SPTLC1O15269 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SPTLC1O15269 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
SPTLC1O15269 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.76■□□□□ 0.59
SPTLC1O15269 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SPTLC1O15269 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTLC1O15269 PMS2P7-201ENST00000506558 1336 ntBASIC18.75■□□□□ 0.59
SPTLC1O15269 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.75■□□□□ 0.59
SPTLC1O15269 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SPTLC1O15269 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.75■□□□□ 0.59
SPTLC1O15269 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.75■□□□□ 0.59
SPTLC1O15269 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SPTLC1O15269 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SPTLC1O15269 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SPTLC1O15269 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.75■□□□□ 0.59
SPTLC1O15269 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.75■□□□□ 0.59
SPTLC1O15269 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.75■□□□□ 0.59
SPTLC1O15269 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.75■□□□□ 0.59
SPTLC1O15269 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.75■□□□□ 0.59
SPTLC1O15269 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.75■□□□□ 0.59
SPTLC1O15269 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.75■□□□□ 0.59
SPTLC1O15269 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTLC1O15269 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTLC1O15269 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPTLC1O15269 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SPTLC1O15269 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.74■□□□□ 0.59
SPTLC1O15269 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SPTLC1O15269 LINC00304-203ENST00000565008 1864 ntBASIC18.74■□□□□ 0.59
SPTLC1O15269 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTLC1O15269 AC009336.1-201ENST00000608941 1553 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms