Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3EO15041 HCG4B-203ENST00000450128 991 ntBASIC21.06■□□□□ 0.96
SEMA3EO15041 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.06■□□□□ 0.96
SEMA3EO15041 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.06■□□□□ 0.96
SEMA3EO15041 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.06■□□□□ 0.96
SEMA3EO15041 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SEMA3EO15041 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SEMA3EO15041 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.06■□□□□ 0.96
SEMA3EO15041 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3EO15041 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SEMA3EO15041 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3EO15041 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SEMA3EO15041 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.05■□□□□ 0.96
SEMA3EO15041 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3EO15041 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3EO15041 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.05■□□□□ 0.96
SEMA3EO15041 MRPL20P1-201ENST00000400819 433 ntBASIC21.05■□□□□ 0.96
SEMA3EO15041 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SEMA3EO15041 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.05■□□□□ 0.96
SEMA3EO15041 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.05■□□□□ 0.96
SEMA3EO15041 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.05■□□□□ 0.96
SEMA3EO15041 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3EO15041 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.05■□□□□ 0.96
SEMA3EO15041 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.05■□□□□ 0.96
SEMA3EO15041 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SEMA3EO15041 AC002347.1-201ENST00000569543 541 ntBASIC21.05■□□□□ 0.96
SEMA3EO15041 MIR4751-201ENST00000578027 74 ntBASIC21.05■□□□□ 0.96
SEMA3EO15041 AC010654.1-201ENST00000615722 808 ntBASIC21.05■□□□□ 0.96
SEMA3EO15041 AC004790.2-201ENST00000623588 572 ntBASIC21.05■□□□□ 0.96
SEMA3EO15041 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3EO15041 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SEMA3EO15041 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SEMA3EO15041 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.04■□□□□ 0.96
SEMA3EO15041 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 MIR1233-2-201ENST00000408138 82 ntBASIC21.04■□□□□ 0.96
SEMA3EO15041 MIR1233-1-201ENST00000408722 82 ntBASIC21.04■□□□□ 0.96
SEMA3EO15041 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.04■□□□□ 0.96
SEMA3EO15041 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.04■□□□□ 0.96
SEMA3EO15041 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.04■□□□□ 0.96
SEMA3EO15041 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SEMA3EO15041 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SEMA3EO15041 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.04■□□□□ 0.96
SEMA3EO15041 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.04■□□□□ 0.96
SEMA3EO15041 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SEMA3EO15041 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3EO15041 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA3EO15041 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA3EO15041 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SEMA3EO15041 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA3EO15041 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
SEMA3EO15041 AL390961.4-201ENST00000623958 2535 ntBASIC21.03■□□□□ 0.96
SEMA3EO15041 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA3EO15041 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.03■□□□□ 0.96
SEMA3EO15041 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
SEMA3EO15041 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SEMA3EO15041 YBX2P1-201ENST00000394192 760 ntBASIC21.03■□□□□ 0.96
SEMA3EO15041 DNAJB3-201ENST00000446806 729 ntBASIC21.03■□□□□ 0.96
SEMA3EO15041 KRT18P2-201ENST00000447938 1258 ntBASIC21.03■□□□□ 0.96
SEMA3EO15041 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA3EO15041 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA3EO15041 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.03■□□□□ 0.96
SEMA3EO15041 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SEMA3EO15041 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA3EO15041 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SEMA3EO15041 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.02■□□□□ 0.96
SEMA3EO15041 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.02■□□□□ 0.96
SEMA3EO15041 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA3EO15041 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SEMA3EO15041 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SEMA3EO15041 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SEMA3EO15041 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA3EO15041 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.02■□□□□ 0.96
SEMA3EO15041 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
SEMA3EO15041 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.02■□□□□ 0.96
SEMA3EO15041 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA3EO15041 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA3EO15041 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms