Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
ATP2A1O14983 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
ATP2A1O14983 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A1O14983 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP2A1O14983 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP2A1O14983 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP2A1O14983 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP2A1O14983 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP2A1O14983 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP2A1O14983 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP2A1O14983 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A1O14983 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A1O14983 AC002310.6-201ENST00000624451 1377 ntBASIC20.05■□□□□ 0.8
ATP2A1O14983 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A1O14983 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ATP2A1O14983 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A1O14983 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATP2A1O14983 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP2A1O14983 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATP2A1O14983 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP2A1O14983 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATP2A1O14983 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATP2A1O14983 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP2A1O14983 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATP2A1O14983 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ATP2A1O14983 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 AP002414.1-201ENST00000391405 1147 ntBASIC20.04■□□□□ 0.8
ATP2A1O14983 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATP2A1O14983 LINC00982-205ENST00000420957 435 ntBASIC20.04■□□□□ 0.8
ATP2A1O14983 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP2A1O14983 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP2A1O14983 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.04■□□□□ 0.8
ATP2A1O14983 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.04■□□□□ 0.8
ATP2A1O14983 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP2A1O14983 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A1O14983 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP2A1O14983 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP2A1O14983 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATP2A1O14983 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP2A1O14983 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.03■□□□□ 0.8
ATP2A1O14983 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP2A1O14983 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ATP2A1O14983 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
ATP2A1O14983 AC004790.2-201ENST00000623588 572 ntBASIC20.03■□□□□ 0.8
ATP2A1O14983 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ATP2A1O14983 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
ATP2A1O14983 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ATP2A1O14983 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP2A1O14983 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP2A1O14983 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A1O14983 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATP2A1O14983 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP2A1O14983 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP2A1O14983 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ATP2A1O14983 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ATP2A1O14983 PTCHD3P3-201ENST00000403073 906 ntBASIC20.02■□□□□ 0.8
ATP2A1O14983 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 ACTG1P4-201ENST00000425123 1122 ntBASIC20.02■□□□□ 0.8
ATP2A1O14983 AC004967.1-201ENST00000453589 447 ntBASIC20.02■□□□□ 0.8
ATP2A1O14983 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP2A1O14983 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP2A1O14983 MIR4751-201ENST00000578027 74 ntBASIC20.02■□□□□ 0.8
ATP2A1O14983 AP001160.2-201ENST00000596071 487 ntBASIC20.02■□□□□ 0.8
ATP2A1O14983 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP2A1O14983 AC010654.1-201ENST00000615722 808 ntBASIC20.02■□□□□ 0.8
ATP2A1O14983 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP2A1O14983 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms