Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC005104.2-201ENST00000427818 678 ntBASIC16.56■□□□□ 0.24
CLDN4O14493 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN4O14493 AC109462.3-201ENST00000573934 613 ntBASIC16.56■□□□□ 0.24
CLDN4O14493 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLDN4O14493 IFNL4P1-201ENST00000607083 540 ntBASIC16.56■□□□□ 0.24
CLDN4O14493 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN4O14493 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN4O14493 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN4O14493 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN4O14493 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLDN4O14493 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CLDN4O14493 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLDN4O14493 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN4O14493 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN4O14493 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN4O14493 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLDN4O14493 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN4O14493 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN4O14493 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN4O14493 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CLDN4O14493 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.55■□□□□ 0.24
CLDN4O14493 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN4O14493 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CLDN4O14493 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.55■□□□□ 0.24
CLDN4O14493 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN4O14493 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CLDN4O14493 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN4O14493 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN4O14493 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN4O14493 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CLDN4O14493 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN4O14493 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN4O14493 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLDN4O14493 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN4O14493 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN4O14493 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN4O14493 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN4O14493 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN4O14493 RBM17P3-201ENST00000417687 1192 ntBASIC16.54■□□□□ 0.24
CLDN4O14493 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN4O14493 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN4O14493 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN4O14493 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CLDN4O14493 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN4O14493 HLA-J-201ENST00000462773 1622 ntBASIC16.54■□□□□ 0.24
CLDN4O14493 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CLDN4O14493 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 AL049757.1-201ENST00000616842 1596 ntBASIC16.54■□□□□ 0.24
CLDN4O14493 REXO1L11P-201ENST00000620964 1927 ntBASIC16.54■□□□□ 0.24
CLDN4O14493 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN4O14493 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN4O14493 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 AC133963.1-201ENST00000504166 1679 ntBASIC16.53■□□□□ 0.24
CLDN4O14493 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN4O14493 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 AL355312.1-201ENST00000407115 2176 ntBASIC16.53■□□□□ 0.24
CLDN4O14493 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.53■□□□□ 0.24
CLDN4O14493 AC004870.1-201ENST00000315132 882 ntBASIC16.53■□□□□ 0.24
CLDN4O14493 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLDN4O14493 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN4O14493 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms