Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 TP73-AS1-210ENST00000637775 1455 ntBASIC16.77■□□□□ 0.28
RTCAO00442 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.77■□□□□ 0.28
RTCAO00442 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTCAO00442 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTCAO00442 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.77■□□□□ 0.27
RTCAO00442 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.77■□□□□ 0.27
RTCAO00442 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RTCAO00442 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTCAO00442 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTCAO00442 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTCAO00442 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RTCAO00442 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTCAO00442 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RTCAO00442 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RTCAO00442 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.76■□□□□ 0.27
RTCAO00442 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.76■□□□□ 0.27
RTCAO00442 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RTCAO00442 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RTCAO00442 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.76■□□□□ 0.27
RTCAO00442 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.76■□□□□ 0.27
RTCAO00442 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.76■□□□□ 0.27
RTCAO00442 AC005104.2-201ENST00000427818 678 ntBASIC16.76■□□□□ 0.27
RTCAO00442 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.76■□□□□ 0.27
RTCAO00442 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.76■□□□□ 0.27
RTCAO00442 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.76■□□□□ 0.27
RTCAO00442 AC009533.2-201ENST00000543664 586 ntBASIC16.76■□□□□ 0.27
RTCAO00442 AC109462.3-201ENST00000573934 613 ntBASIC16.76■□□□□ 0.27
RTCAO00442 AC019129.2-201ENST00000609837 1235 ntBASIC16.76■□□□□ 0.27
RTCAO00442 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.76■□□□□ 0.27
RTCAO00442 AC108860.2-201ENST00000562760 2183 ntBASIC16.76■□□□□ 0.27
RTCAO00442 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RTCAO00442 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 LYSMD4-203ENST00000378904 2122 ntBASIC16.76■□□□□ 0.27
RTCAO00442 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.76■□□□□ 0.27
RTCAO00442 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RTCAO00442 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.76■□□□□ 0.27
RTCAO00442 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTCAO00442 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.76■□□□□ 0.27
RTCAO00442 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.76■□□□□ 0.27
RTCAO00442 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RTCAO00442 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.75■□□□□ 0.27
RTCAO00442 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.75■□□□□ 0.27
RTCAO00442 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RTCAO00442 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RTCAO00442 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.75■□□□□ 0.27
RTCAO00442 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.75■□□□□ 0.27
RTCAO00442 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RTCAO00442 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.75■□□□□ 0.27
RTCAO00442 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.75■□□□□ 0.27
RTCAO00442 FAM220CP-201ENST00000395253 831 ntBASIC16.75■□□□□ 0.27
RTCAO00442 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.75■□□□□ 0.27
RTCAO00442 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.75■□□□□ 0.27
RTCAO00442 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.75■□□□□ 0.27
RTCAO00442 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.75■□□□□ 0.27
RTCAO00442 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.75■□□□□ 0.27
RTCAO00442 AC099336.1-202ENST00000602961 463 ntBASIC16.75■□□□□ 0.27
RTCAO00442 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.75■□□□□ 0.27
RTCAO00442 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.75■□□□□ 0.27
RTCAO00442 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RTCAO00442 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.75■□□□□ 0.27
RTCAO00442 AL138688.1-201ENST00000624851 1594 ntBASIC16.75■□□□□ 0.27
RTCAO00442 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.75■□□□□ 0.27
RTCAO00442 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTCAO00442 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms