Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 HLA-J-201ENST00000462773 1622 ntBASIC18.72■□□□□ 0.59
O00370 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.72■□□□□ 0.59
O00370 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.72■□□□□ 0.59
O00370 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.72■□□□□ 0.59
O00370 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.72■□□□□ 0.59
O00370 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.72■□□□□ 0.59
O00370 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.72■□□□□ 0.59
O00370 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.72■□□□□ 0.59
O00370 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.72■□□□□ 0.59
O00370 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.72■□□□□ 0.59
O00370 AC012313.10-201ENST00000623509 926 ntBASIC18.72■□□□□ 0.59
O00370 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.72■□□□□ 0.59
O00370 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.72■□□□□ 0.59
O00370 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.72■□□□□ 0.59
O00370 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.71■□□□□ 0.59
O00370 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
O00370 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
O00370 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.71■□□□□ 0.59
O00370 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.71■□□□□ 0.59
O00370 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
O00370 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.71■□□□□ 0.59
O00370 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.71■□□□□ 0.59
O00370 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.71■□□□□ 0.59
O00370 MIR5100-201ENST00000579544 119 ntBASIC18.71■□□□□ 0.59
O00370 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.71■□□□□ 0.59
O00370 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
O00370 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
O00370 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
O00370 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.71■□□□□ 0.59
O00370 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
O00370 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.71■□□□□ 0.58
O00370 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
O00370 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
O00370 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.7■□□□□ 0.58
O00370 AC002558.1-201ENST00000488906 803 ntBASIC18.7■□□□□ 0.58
O00370 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.7■□□□□ 0.58
O00370 PRELID1P1-202ENST00000567272 903 ntBASIC18.7■□□□□ 0.58
O00370 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.7■□□□□ 0.58
O00370 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.7■□□□□ 0.58
O00370 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
O00370 AL049757.1-201ENST00000616842 1596 ntBASIC18.7■□□□□ 0.58
O00370 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.7■□□□□ 0.58
O00370 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
O00370 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.7■□□□□ 0.58
O00370 HTR7P1-202ENST00000624664 4411 ntBASIC18.7■□□□□ 0.58
O00370 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.7■□□□□ 0.58
O00370 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.7■□□□□ 0.58
O00370 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
O00370 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
O00370 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
O00370 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
O00370 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
O00370 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 AC124067.4-201ENST00000519691 2379 ntBASIC18.69■□□□□ 0.58
O00370 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms