Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 AL353801.3-201ENST00000609898 542 ntBASIC14.15□□□□□ -0.14
SRRM4A7MD48 AL592071.1-201ENST00000611956 408 ntBASIC14.15□□□□□ -0.14
SRRM4A7MD48 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 AD000864.1-201ENST00000624076 2295 ntBASIC14.15□□□□□ -0.14
SRRM4A7MD48 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.15□□□□□ -0.15
SRRM4A7MD48 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SRRM4A7MD48 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 AC007967.3-201ENST00000434308 558 ntBASIC14.14□□□□□ -0.15
SRRM4A7MD48 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 AL139327.4-201ENST00000612362 153 ntBASIC14.14□□□□□ -0.15
SRRM4A7MD48 IGHV3-41-201ENST00000613121 348 ntBASIC14.14□□□□□ -0.15
SRRM4A7MD48 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRRM4A7MD48 AC125634.1-201ENST00000438758 1403 ntBASIC14.14□□□□□ -0.15
SRRM4A7MD48 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.14□□□□□ -0.15
SRRM4A7MD48 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 KRT8P26-201ENST00000534154 1276 ntBASIC14.13□□□□□ -0.15
SRRM4A7MD48 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 AC090616.6-201ENST00000582640 721 ntBASIC14.13□□□□□ -0.15
SRRM4A7MD48 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 NTF6B-201ENST00000591913 560 ntBASIC14.13□□□□□ -0.15
SRRM4A7MD48 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 AC016396.2-201ENST00000562575 1417 ntBASIC14.13□□□□□ -0.15
SRRM4A7MD48 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms