Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 SIGLEC30P-201ENST00000455569 941 ntBASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 PCDHB18P-201ENST00000524813 2368 ntBASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 AC005332.8-201ENST00000622750 2735 ntBASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 AL135999.2-201ENST00000622438 1686 ntBASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 HLA-A-201ENST00000376802 1334 ntBASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 RPS2P1-201ENST00000434010 821 ntBASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 AL049840.3-201ENST00000602669 611 ntBASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 AC064862.7-201ENST00000604520 867 ntBASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN16Q9Y5I7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 SLC25A1P3-201ENST00000395415 828 ntBASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 MIR7706-201ENST00000613747 67 ntBASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 FAM215A-202ENST00000632077 792 ntBASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 AC107918.4-202ENST00000641623 219 ntBASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN16Q9Y5I7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms