Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 AC004461.1-201ENST00000412461 403 ntBASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 AC011467.4-201ENST00000594891 528 ntBASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 AC120498.9-201ENST00000339021 3867 ntBASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 AP000997.3-201ENST00000623333 2250 ntBASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDK11AQ9UQ88 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CDK11AQ9UQ88 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC26.95■■□□□ 1.91
CDK11AQ9UQ88 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CDK11AQ9UQ88 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CDK11AQ9UQ88 REXO1L9P-201ENST00000604264 2108 ntBASIC26.95■■□□□ 1.91
CDK11AQ9UQ88 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 PAWRP1-201ENST00000451083 565 ntBASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDK11AQ9UQ88 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 HLA-J-203ENST00000494367 1087 ntBASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 LSM12-202ENST00000585388 942 ntTSL 3 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 ACTL9-202ENST00000612068 1252 ntBASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDK11AQ9UQ88 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 AC112191.1-201ENST00000523689 701 ntBASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 AC022145.2-201ENST00000598203 171 ntBASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms