Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 STK19B-204ENST00000512515 211 ntBASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 AC009336.1-201ENST00000608941 1553 ntBASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 REXO1L6P-202ENST00000619970 1078 ntBASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCDHA4Q9UN74 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 RBM17P3-201ENST00000417687 1192 ntBASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 LINC01711-201ENST00000598340 967 ntBASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 HCG11-201ENST00000411553 5696 ntBASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA4Q9UN74 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 AC046185.3-201ENST00000623228 1824 ntBASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 SPDYE21P-201ENST00000413323 827 ntBASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
PCDHA4Q9UN74 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 SIGLEC16-201ENST00000599858 1437 ntBASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms