Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 AC092910.1-201ENST00000482027 1129 ntBASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 HLA-J-201ENST00000462773 1622 ntBASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 FAM220CP-201ENST00000395253 831 ntBASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 AC007967.3-201ENST00000434308 558 ntBASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 AC098831.1-202ENST00000438821 336 ntBASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 AL139288.1-201ENST00000623748 933 ntBASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 AP000867.4-201ENST00000641616 219 ntBASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.85■□□□□ 0.77
HDAC6Q9UBN7 AC099398.1-201ENST00000567919 2776 ntBASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 MTDHP4-201ENST00000600287 670 ntBASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HDAC6Q9UBN7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 AC097374.2-201ENST00000618617 1306 ntBASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms