Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SPTLC3Q9NUV7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 AC009065.1-201ENST00000564055 1225 ntBASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 AC010240.3-201ENST00000607688 395 ntBASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SPTLC3Q9NUV7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 AC024909.3-201ENST00000611513 2257 ntBASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 UNC93B2-201ENST00000285383 730 ntBASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 AC007663.1-201ENST00000438948 1240 ntBASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 BX088651.1-201ENST00000540551 451 ntBASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC3Q9NUV7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 MIR3180-4-201ENST00000582223 153 ntBASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC3Q9NUV7 AC046185.3-201ENST00000623228 1824 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms