Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 AL139400.1-201ENST00000366220 510 ntBASIC20.41■□□□□ 0.86
EFCC1Q9HA90 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 HCG4B-203ENST00000450128 991 ntBASIC20.41■□□□□ 0.86
EFCC1Q9HA90 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EFCC1Q9HA90 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 HLA-J-202ENST00000469281 1241 ntBASIC20.4■□□□□ 0.86
EFCC1Q9HA90 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 AD001527.2-201ENST00000622994 785 ntBASIC20.4■□□□□ 0.86
EFCC1Q9HA90 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.4■□□□□ 0.86
EFCC1Q9HA90 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
EFCC1Q9HA90 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
EFCC1Q9HA90 ESPNP-201ENST00000270691 2015 ntBASIC20.39■□□□□ 0.86
EFCC1Q9HA90 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
EFCC1Q9HA90 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
EFCC1Q9HA90 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EFCC1Q9HA90 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EFCC1Q9HA90 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
EFCC1Q9HA90 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
EFCC1Q9HA90 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.39■□□□□ 0.85
EFCC1Q9HA90 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EFCC1Q9HA90 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.39■□□□□ 0.85
EFCC1Q9HA90 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.39■□□□□ 0.85
EFCC1Q9HA90 AC108073.2-201ENST00000464002 357 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms