Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBQLN3Q9H347 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 AC100803.2-201ENST00000562459 1963 ntBASIC16.3■□□□□ 0.2
UBQLN3Q9H347 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 UNC93B7-201ENST00000509439 705 ntBASIC16.3■□□□□ 0.2
UBQLN3Q9H347 AC112698.1-201ENST00000510299 916 ntBASIC16.3■□□□□ 0.2
UBQLN3Q9H347 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 AC138894.3-201ENST00000603787 634 ntBASIC16.3■□□□□ 0.2
UBQLN3Q9H347 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 AL691432.3-201ENST00000621860 400 ntBASIC16.3■□□□□ 0.2
UBQLN3Q9H347 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.3■□□□□ 0.2
UBQLN3Q9H347 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 AC009053.2-201ENST00000563701 2365 ntBASIC16.29■□□□□ 0.2
UBQLN3Q9H347 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 POM121L3P-201ENST00000419331 1163 ntBASIC16.29■□□□□ 0.2
UBQLN3Q9H347 MINOS1P3-201ENST00000457048 203 ntBASIC16.29■□□□□ 0.2
UBQLN3Q9H347 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 AC091304.2-201ENST00000564639 760 ntBASIC16.29■□□□□ 0.2
UBQLN3Q9H347 AL138831.2-201ENST00000606564 490 ntBASIC16.29■□□□□ 0.2
UBQLN3Q9H347 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN3Q9H347 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms