Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD4Q9H0A8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 SNORA78-201ENST00000459373 127 ntBASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
COMMD4Q9H0A8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 AL355075.4-201ENST00000554988 638 ntBASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms