Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AL691403.2-201ENST00000618460 490 ntBASIC18.3■□□□□ 0.52
LRRC3Q9BY71 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 AC009336.1-201ENST00000608941 1553 ntBASIC18.3■□□□□ 0.52
LRRC3Q9BY71 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 AC108073.2-201ENST00000464002 357 ntBASIC18.29■□□□□ 0.52
LRRC3Q9BY71 AC002558.1-201ENST00000488906 803 ntBASIC18.29■□□□□ 0.52
LRRC3Q9BY71 RPS15P9-201ENST00000494093 319 ntBASIC18.29■□□□□ 0.52
LRRC3Q9BY71 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC3Q9BY71 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 KRT18P55-202ENST00000578578 1546 ntBASIC18.28■□□□□ 0.52
LRRC3Q9BY71 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.28■□□□□ 0.52
LRRC3Q9BY71 DNAJB3-201ENST00000446806 729 ntBASIC18.28■□□□□ 0.52
LRRC3Q9BY71 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 AC002347.1-201ENST00000569543 541 ntBASIC18.28■□□□□ 0.52
LRRC3Q9BY71 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC3Q9BY71 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 HCG4B-203ENST00000450128 991 ntBASIC18.27■□□□□ 0.52
LRRC3Q9BY71 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 IGHV3-52-201ENST00000519770 353 ntBASIC18.27■□□□□ 0.52
LRRC3Q9BY71 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC3Q9BY71 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms