Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 KRT18P3-201ENST00000451602 1288 ntBASIC17.41■□□□□ 0.38
HDAC8Q9BY41 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC8Q9BY41 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 AL135999.2-201ENST00000622438 1686 ntBASIC17.4■□□□□ 0.38
HDAC8Q9BY41 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 AL390961.4-201ENST00000623958 2535 ntBASIC17.4■□□□□ 0.38
HDAC8Q9BY41 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 AP002414.1-201ENST00000391405 1147 ntBASIC17.4■□□□□ 0.38
HDAC8Q9BY41 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC8Q9BY41 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
HDAC8Q9BY41 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 PTCHD3P3-201ENST00000403073 906 ntBASIC17.39■□□□□ 0.37
HDAC8Q9BY41 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 PRSS29P-201ENST00000440800 595 ntBASIC17.39■□□□□ 0.37
HDAC8Q9BY41 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.39■□□□□ 0.37
HDAC8Q9BY41 RNA5SP416-201ENST00000516838 111 ntBASIC17.39■□□□□ 0.37
HDAC8Q9BY41 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HDAC8Q9BY41 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC8Q9BY41 AC012317.2-201ENST00000623305 2251 ntBASIC17.38■□□□□ 0.37
HDAC8Q9BY41 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC8Q9BY41 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms