Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 LINC01568-207ENST00000641790 1380 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 FITM1-202ENST00000559294 800 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 AC145285.6-201ENST00000604632 637 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 AC012306.2-201ENST00000609350 630 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 DGCR10-201ENST00000609839 495 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 MIR6786-201ENST00000616843 113 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 AC005363.2-201ENST00000618631 242 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 MYC-208ENST00000641036 567 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 NFIC-211ENST00000641145 8399 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 AC104640.1-201ENST00000562617 2109 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 KRT18P22-201ENST00000402024 1347 ntBASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 AC138028.4-201ENST00000564984 1845 ntBASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 TSPY23P-201ENST00000440136 739 ntBASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 C2orf69P3-201ENST00000565542 1120 ntBASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 AC104581.4-201ENST00000623126 3052 ntBASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms